Serratia marcescens subsp. marcescens Db11: SMDB11_3184
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Entry
SMDB11_3184 CDS
T03985
Symbol
truC
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smac03016
]
SMDB11_3184 (truC)
Enzymes [BR:
smac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
SMDB11_3184 (truC)
Transfer RNA biogenesis [BR:
smac03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SMDB11_3184 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CDG13749
LinkDB
All DBs
Position
complement(3366148..3366918)
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AA seq
256 aa
AA seq
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MIEILYQDEHLVAVNKPSGWLVHRSWLDRHETRFMMQTVRDQLGQHVFTVHRLDRPTSGV
LLMALSSEVARLLSQQFEQHQVQKTYHAVVRGYVQEGATLDYPLTAELDKIADKHADADK
GPQPAVTHYRPLAQVEMPVAVGRYDSARYSLVELQPETGRKHQLRRHMAHLRHPIIGDSK
HGDLRQNRGMAQHFGCPRLMLHASHLQLTHPVSGEPLQVTARWDEDWQGVMAQFGWAGVF
PELAGVEFSAANGQDS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagattttgtatcaggatgaacacctggtggcggtgaacaaaccgtcgggctgg
ttggtacaccgcagttggctggatcgtcatgaaacacgttttatgatgcaaacggtgcgc
gatcagctcgggcagcacgtctttaccgtgcaccgtctcgatcgcccgacctccggcgtg
ctgctgatggcgctttccagcgaggtggcgcgcctgctgtcgcagcagttcgagcagcat
caggtgcagaaaacctaccatgcggtggtgcgcggttacgtgcaggagggggcgaccctc
gactacccgctgacggcggagctggacaaaatcgccgataaacatgccgatgccgacaag
gggccgcagccggccgtcacgcactaccggccgttggcgcaggtagagatgccggtggcc
gtcggccgctacgacagcgcgcgttacagtctggtggaactgcaaccggaaaccggccgc
aagcaccaattgcggcgccacatggcgcatcttcgccatccgatcatcggtgacagcaag
cacggcgatctgcggcagaaccgtgggatggcgcagcatttcggctgcccgcgcctgatg
ctgcacgccagccatctgcagctgacgcacccggtgagcggcgagccgctgcaggtgacg
gcgcgctgggacgaagactggcaaggggtgatggcgcagttcggctgggcgggggtattc
cctgaacttgccggggttgagtttagcgcggctaacggtcaggatagctga
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