Sphingopyxis macrogoltabida EY-1: AN936_04455
Help
Entry
AN936_04455 CDS
T04104
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag00300
Lysine biosynthesis
smag00470
D-Amino acid metabolism
smag01100
Metabolic pathways
smag01110
Biosynthesis of secondary metabolites
smag01120
Microbial metabolism in diverse environments
smag01230
Biosynthesis of amino acids
Module
smag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AN936_04455
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AN936_04455
Enzymes [BR:
smag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AN936_04455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALH79643
UniProt:
A0A0N7GS39
LinkDB
All DBs
Position
956538..957767
Genome browser
AA seq
409 aa
AA seq
DB search
MKPHGPIPPGFAADDDGMLMIGSDRAEALVDAAGDTPLFVYDSALLTARVAEWRAAMPDN
VQLHFAMKANPYAPLLAYMAQLVDGFDVASGGELKAALASGMAAEHISFAGPGKRDRELE
AAIAAGATLNLESAGEAERALSIGARLGVTPKLAVRVNPDFDLKGSGMKMGGGAKPFGVD
ADDVPILVRRLIDTGADWQGFHIFAGSQALDAGAIAETQAQTVALAARLANEIGAVPPLV
NLGGGMGVPYFPGDKAVDAAAVGAALAETLDARDRALEDSRFAMELGRWLVAEAGVYLTR
IVDRKVSHGETFLVTDGGLHHQLAASGNFGTVIRRNYPIAVVNRFGGEAVETVSVVGCLC
TPLDRLGDQVALPRADVGDLIAVFQAGAYGASASPATFLGQGPAREMLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcacggtccgatcccgcccggttttgccgccgacgacgacggcatgctgatg
atcggcagcgaccgcgccgaggcgctggtcgatgccgcgggcgacacgccgctgttcgtc
tatgacagcgcactgctgaccgcgcgcgtcgccgaatggcgggcggcgatgcccgacaat
gtccaattgcatttcgcgatgaaggcgaacccctatgcgccactgctggcctatatggcg
cagctggtcgacgggttcgatgtcgcgtcggggggcgagctcaaggcggcgctcgccagc
ggcatggcggcggagcacattagcttcgcgggtccgggcaagcgcgaccgcgaactcgaa
gcggcgattgcggcgggcgcgacgctcaacctcgaatcggctggcgaagccgaacgcgcg
ctgtcgatcggcgcgcggctcggcgtgacgccgaagctcgcggtacgggtcaatcccgat
ttcgatctcaagggatcggggatgaagatgggcggcggcgccaagccgttcggggtcgat
gccgacgacgtgccgatactggtgcgccgcctgatcgataccggggccgactggcagggc
tttcatattttcgcaggatcgcaggcacttgatgcgggggcgattgcggagacacaggcg
cagaccgtcgcgctggcggcgcggctggcgaacgagatcggggcggtgccgccgctcgtc
aacctcggcggcgggatgggggtgccttattttccgggcgacaaggcggtcgatgccgcc
gcggtcggcgcggcgcttgccgagacgctcgatgcgcgcgaccgggcgctcgaggacagc
cgcttcgcgatggaacttggccgctggcttgtcgccgaggcgggtgtttacctgacccgc
atcgtcgaccggaaggtcagccatggcgagaccttcctcgtcaccgacggcgggctccat
caccagctcgccgcgagcggcaatttcgggacggtgatccgtcgcaactatccgatcgcg
gtcgtgaaccgcttcggcggcgaggcggtcgagacggtttcggtcgtcggctgcctctgc
acgccgctcgaccgtctcggcgaccaggtcgcattgccgcgcgccgatgtcggcgacctg
atcgcggtatttcaggccggtgcttatggcgcttcggcgagcccggcgacgtttcttggg
caggggccggcgcgcgagatgctcgtctga
DBGET
integrated database retrieval system