Streptomyces malaysiensis: SMALA_1790
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Entry
SMALA_1790 CDS
T05189
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smal
Streptomyces malaysiensis
Pathway
smal03030
DNA replication
smal03430
Mismatch repair
smal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMALA_1790
03430 Mismatch repair
SMALA_1790
03440 Homologous recombination
SMALA_1790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smal03032
]
SMALA_1790
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_1790
Enzymes [BR:
smal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMALA_1790
DNA replication proteins [BR:
smal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMALA_1790
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMALA_1790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
DNA_pol_A_exo1
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
ATL82024
UniProt:
A0A291SM93
LinkDB
All DBs
Position
2385817..2386803
Genome browser
AA seq
328 aa
AA seq
DB search
MLEDPTATAPHPVPPSSWPATYPQGYAVVDVETTGLARDDRIVSAAVYQLDARGTVQDHW
YTLVDPQRDPGPVWIHGLTEEVLAGAPRFAEIAGELSERLADRVLVAHNAAFDWSMLARE
YARTRTAAPVRQRLCTIALSKELGLPLPNHKLETLAAHYGVVQRRAHHALDDARVLAETF
RPSLHRAAETGLRLPLLACQPLTEWSEGPAIGRQRSYRQSWRPSRKLPACPYPNPGRYEP
GGQLVQGMRVAFSGDTSVDRELLEDRTIEAGLHVASSVSRLTSVLVTNDPESPTSKTTKA
RSFGTPIIDEAAFMQLLLDVTPAPPTNR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccccacggcaaccgcaccgcaccccgtaccgccgtcctcctggccggcc
acctatccgcaggggtacgcggtcgtcgacgtggagaccaccggcctcgcccgcgacgac
cggatcgtctccgcggcggtctatcagctcgacgcccggggcacggtgcaggaccactgg
tacaccctggtcgatccgcagcgcgatccgggcccggtgtggatccacggcctcaccgag
gaggtgctggcgggcgccccgcgcttcgccgagatcgccggggagctctccgagcggctg
gccgaccgcgtcctggtcgcgcacaacgccgccttcgactggtcgatgctcgcccgcgag
tacgcccgcaccaggaccgccgcgccggtgcggcagcggctgtgcaccatcgccctctcc
aaggagctgggcctgccgctgcccaaccacaagctggagaccctcgccgcgcactacgga
gtggtccagcggcgcgcccaccacgccctggacgacgcccgagtgctcgccgagaccttc
cggcccagcctccaccgggccgccgagaccgggctgcgcctgccgctgctggcctgccag
ccgctcaccgagtggtccgaaggcccggcgatcggccgccagcggtcgtaccggcagagc
tggcgtcccagccgcaagctccccgcctgcccctaccccaaccccgggcgctacgagccg
ggcgggcagctcgtccagggcatgcgggtggcgttctccggggacacctccgtcgaccgc
gagctgctggaggaccggacgatcgaggccgggctgcatgtggcctccagcgtctcccgg
ctcaccagcgtgctggtcaccaacgaccccgagtcgcccacgtccaagaccaccaaggcc
cgctccttcggcacgcccatcatcgacgaggccgccttcatgcagctcctcctggacgtc
acccccgcgccgccgacaaacaggtga
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