Streptomyces malaysiensis: SMALA_5955
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Entry
SMALA_5955 CDS
T05189
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smal
Streptomyces malaysiensis
Pathway
smal03030
DNA replication
smal03430
Mismatch repair
smal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMALA_5955
03430 Mismatch repair
SMALA_5955
03440 Homologous recombination
SMALA_5955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smal03032
]
SMALA_5955
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_5955
Enzymes [BR:
smal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMALA_5955
DNA replication proteins [BR:
smal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMALA_5955
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMALA_5955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ATL86183
UniProt:
A0A291SZ78
LinkDB
All DBs
Position
7333917..7334639
Genome browser
AA seq
240 aa
AA seq
DB search
MGWHRGLLIGFDLETTGTDPRTARIVTAAVVEARGGEPIGRREWLADPQVPIPDDAVAVH
GITNERAAAEGRPAREVVEEVAEVLVAHWRSGAPVVAYNAAFDLSLLAAELGRHGLRPLS
ERLEGAETGPVVDPYTIDRAVDRYRKGKRTLEAVCGEYGVVHDRAHDAGADALAAVRVAC
ALAERHREVAGLELWDLHRKQVGWYAHWAADFQSWLRRKGTPDAVVDGGWPLREAEAAVG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggggctgctgatcggattcgatctggagacgacgggcaccgatccg
cggacggcgaggatcgtcacggcggccgtggtcgaggcgaggggcggggagccgatcggc
cggcgcgagtggctggccgacccccaagtgcccataccggacgacgcggtggcggtgcac
gggatcaccaatgagcgggcggcggcggagggccggcccgcgcgtgaggtggtagaggag
gtcgccgaggtgctggtggcccactggcgctccggcgccccggtggtggcgtacaacgcg
gcgttcgacctcagcctgctcgccgccgagttggggcggcacgggctgcgcccgctgagc
gagcggctggaaggggcggagaccggccccgtcgtggatccgtacacgatagaccgcgcc
gtcgaccgctatcgcaagggcaagcgcacgctggaggcggtgtgcggggagtacggcgtg
gtgcacgaccgcgcccatgacgccggtgcggacgcgctggcggcggtgcgggtcgcctgc
gcgctcgccgagcgccaccgcgaggtcgccgggctcgagctgtgggacctccaccgcaag
caggtggggtggtacgcccactgggcggccgacttccagtcctggctgcgccgcaagggc
acgccggacgcggtggtggacggcggctggcccctgcgggaggcggaggcggcggtgggg
taa
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