Streptomyces marincola: CAG99_13620
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Entry
CAG99_13620 CDS
T08123
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
smao
Streptomyces marincola
Brite
KEGG Orthology (KO) [BR:
smao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smao03021
]
CAG99_13620
Transcription machinery [BR:
smao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAG99_13620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ARQ69766
UniProt:
A0A1W7CYD4
LinkDB
All DBs
Position
complement(3100253..3100942)
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AA seq
229 aa
AA seq
DB search
MVDHAPGEPAVPSDKELLEQHIAGSPDAFSEIVRRHRDRLWAVALRTLGDREEAADALQD
AFVSAYRAAHTFRGQAAVTTWLHRITVNACLDRVRKAKSRRTDPMPEPERLENLLTPHES
AEVPAERQDLRRQLSAALTQLPEEQRAVLVLVDMQGYPVAEAADILQVPVGTIKSRCARA
RARLLPLLRHLHPRAAEEDQTRNRTPGTSVPPARDTGDTGAMRGGGTHS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatcacgcaccgggcgagcccgccgttccctccgacaaggagcttcttgagcag
cacatagcgggaagccccgatgccttctccgagatcgtccgccgccaccgtgaccggttg
tgggccgtggcgctgcgcaccctcggcgaccgggaggaggccgccgacgcgcttcaggat
gccttcgtctccgcgtaccgcgccgcccacactttccgtggtcaggcagcggtcacgacg
tggctgcaccgcatcacggtcaacgcctgcctggaccgcgtgcgcaaggccaagagccgg
cggaccgatcccatgccggagccggagaggctggagaacctcctcaccccccacgagtcc
gccgaggtgccggcggagcgccaggacctgcgccgccaactgagcgccgcgctgacccag
cttcccgaggaacaacgggcggtactcgtcctcgtcgacatgcagggctatcccgtggcc
gaggccgccgacatcctccaggtgcccgtgggcacgatcaagagtcggtgcgcacgcgct
cgggcccggctccttcccttgttgcggcacctgcacccccgggctgccgaggaggatcag
acgaggaaccggacacctggtacatccgtcccaccagcaagagatacgggggataccggc
gccatgcggggaggaggcacacactcgtga
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