Serratia marcescens SM39: SM39_2255
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Entry
SM39_2255 CDS
T03592
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
smar
Serratia marcescens SM39
Pathway
smar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SM39_2255 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smar01007
]
SM39_2255 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smar03016
]
SM39_2255 (aspS)
03029 Mitochondrial biogenesis [BR:
smar03029
]
SM39_2255 (aspS)
Enzymes [BR:
smar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SM39_2255 (aspS)
Amino acid related enzymes [BR:
smar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SM39_2255 (aspS)
Transfer RNA biogenesis [BR:
smar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SM39_2255 (aspS)
Prokaryotic type
Other AARSs
SM39_2255 (aspS)
Mitochondrial biogenesis [BR:
smar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SM39_2255 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAO34271
LinkDB
All DBs
Position
complement(2320312..2322096)
Genome browser
AA seq
594 aa
AA seq
DB search
MRTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKVAFDKA
YDLRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHALEIINRSEPLPLDSNQVNSEEA
RLKYRYLDLRRPEMAERLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
ADQVREVMEKLARELWLDVKGVDLGDFPVMTFAEAMRRFGSDKPDLRNPLELVDVADLVK
DVEFKVFSGPANDAKGRVAAIRVPGGAQLTRKQIDEYGAFVNIYGAKGLAWLKVNDRAAG
MEGVQSPIAKFLSADVLEGILARTDAQTGDILFFGADSVKIVTDAMGALRLKLGRDLALT
QLDSWAPLWVVDFPMFEEDDEGGLAAMHHPFTSPRDMSPEELAAAPVNAIANAYDMVING
YEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAFGLDRLVM
LLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAISVVKKAGAEQESE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgaatattgcgggcagttgaatctgtcccacgtgggccaggaagtcactctg
tgtggttgggtcaatcgtcgtcgcgatctcggcggcctgatctttattgatatgcgcgac
cgcgaaggcatcgtgcaggtgttcttcgatccggaccagaaagtggcgttcgacaaggcc
tacgacctgcgcaatgagttctgcatccagatcgtcggcaccgtgcgtgcgcgtccggac
agccagatcaataaagatatggccaccggcgaagtggaagtgttcgcccacgcgctggag
atcatcaaccgctccgagccgctgccgctggactccaatcaggtcaacagcgaagaagcg
cgcctgaaataccgctacctggatctgcgccgcccggaaatggccgagcgtctgaagacc
cgcgccaaaatcaccagcttcgtgcgccgcttcatggacagccacggcttcctcgatatc
gaaacgccgatgctgaccaaggcgacgccggaaggcgcccgcgattacctggtgccgagc
cgcgtacacaagggcaaattctacgcgctgccgcagtccccgcagctgttcaaacagctg
ctgatgatgtccggcttcgatcgttactaccagatcgtcaaatgcttccgtgacgaagac
ctgcgtgcggaccgtcagcctgaattcacccagatcgacgtcgaaacctccttcatgacc
gccgatcaggtgcgtgaagtgatggagaagttggcgcgcgaactgtggctggacgtgaag
ggcgtggatctgggcgatttcccggtcatgaccttcgccgaagcgatgcgtcgctttggc
tccgacaagccggacctgcgtaacccgctggagctggtggacgtggccgacctggtcaag
gacgtcgagtttaaagtcttctccggcccggccaacgacgccaaaggccgcgtggcggcg
atccgcgtaccgggcggcgcgcagctgacccgcaagcagatcgacgagtacggcgctttc
gtcaacatctacggcgccaaaggcctggcgtggctgaaggtcaacgaccgcgccgccggc
atggaaggcgtgcagagcccgatcgccaaattcctcagtgcagacgtgctggaaggcatc
ctggcgcgcaccgatgcgcagaccggcgatatcctgttcttcggcgccgacagcgtcaag
attgtcaccgatgcgatgggcgcgctgcgcctgaagctggggcgcgatctggcgctgacc
caactcgacagctgggcaccgctgtgggtggttgacttcccgatgttcgaagaagacgac
gagggcggcctggcggccatgcaccacccgttcacctcgccgcgcgacatgagcccggaa
gagctggcggcagcgccggtcaacgccatcgccaacgcctatgacatggtgatcaacggt
tacgaagtgggcggcggttcggtgcgtatccaccgcagcgaaatgcagcagacggtgttc
agcattctgggcattaacgaacacgaacagcgcgagaagttcggcttcctgctggacgcg
ctgaagtacggtacgccgccgcacgccggcctggccttcggcctggatcgtctggtgatg
ctgttgaccggcaccgacaacatccgcgacgtcatcgccttcccgaaaaccaccgcggcg
gcctgtctgatgaccgacgcgccgagcttcgccaacccggctgcgctgcaggagctggcg
atcagcgtggtaaagaaagccggtgcggaacaagagagcgagtga
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