Serratia marcescens SM39: SM39_4526
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Entry
SM39_4526 CDS
T03592
Symbol
rpoZ
Name
(GenBank) RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SM39_4526 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smar03021
]
SM39_4526 (rpoZ)
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_4526 (rpoZ)
Enzymes [BR:
smar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SM39_4526 (rpoZ)
Transcription machinery [BR:
smar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SM39_4526 (rpoZ)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SM39_4526 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1599
Motif
Other DBs
NCBI-ProteinID:
BAO36445
LinkDB
All DBs
Position
complement(4725569..4725844)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQTGGKDALVPEENDKYTVIALREIEEGLIT
SQILDVRERQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgggcgcgtcagatccagaccggcggcaaagatgcactggttccg
gaagagaacgacaagtacaccgttatcgccctgcgcgaaatcgaagaaggcctgatcacc
agccagatcctcgacgtgcgtgagcgccaggagcagcaagagcaggaagccgcagagatt
caagcggttaccgcgattgctgaaggtcgtcgttaa
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