Shewanella marisflavi: CFF01_03855
Help
Entry
CFF01_03855 CDS
T05400
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_03855
Transporters [BR:
smav02000
]
Other transporters
Pores ion channels [TC:
1
]
CFF01_03855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
ASJ95794
LinkDB
All DBs
Position
complement(860205..862376)
Genome browser
AA seq
723 aa
AA seq
DB search
MKLKPISLAIFCALSMTSMPGHAETQTAQTNQEKQQVDEQIEKIEVRGRYVQGYNAHSVG
GASRLDLAIVDIPQSVSVITDAQLDDFQLNDINSALDSATGINVERIETDRTYYTARGFD
ITNFQIDGVGLPLTSGNNHADEDTAIYDRIEVIRGANGLMTGVGNPSATVNFIRKRPTAD
NQLNLQASYGSFNNLRVEADASGRLNDTFDGRVVAVKQTKESYLDRYETDKSVLYAFLEA
NLSDDTSLSVSHSYINNDATGNNWGALPLYYTDGSPTHYDRSTNTSADWSNWQVIKQNTV
VELSHYFGNDWRLRATYSHKSTDEDTELFYVYGTPDRETGLGLTGYGSEYDLDESHDLVD
IYVDGEVSLFGREHQLVAGVNYAKVDYIDTSLYDYTTGNGFPAMPDLNDWDGNTPKPIFA
DSPRGSDVSAKQQAAYFTGRFNLFEGFHLIAGGRFNKWQAEGVSYSKLQDVEDSQFIPYL
GAVYRITPELVAYASYTETFKSQTEKDIDDNLLAPVTGESKEIGLKSELFNGRLIASLAY
FDIQQVNLAVPDPRTADLPPTDQRYIGADGINSKGYEFEVAGEVFDGLNLSLGFTDFDID
GHDENAEIVAAYTPSRLLKFAATYDVAAIEGLSIGMNMRWQDDISRHQGVVGDGFDNAGE
EIITRQDAYAIVDLMARYQFNENVQLSVNANNVTDEKYLNSLYWAQAFYGAPANYSATLS
WKI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaagcctatttcgctcgcaatcttctgtgccctaagcatgacttccatgcct
ggccatgcagaaacccaaaccgctcagacaaaccaagaaaagcaacaggtcgatgaacag
atcgagaagatcgaggttcgcggacgctatgtgcaaggctacaacgcccattcagttggc
ggcgcctcacggctggatctggccattgtcgacattcctcagtctgtctcggtgatcaca
gatgcacagctcgacgacttccagctcaatgacatcaacagcgccctggacagtgcgaca
ggtatcaatgttgagcgtatcgagaccgaccgcacctactacacggcgcgcggattcgac
atcaccaactttcagatagacggcgtcggcctgccgctcacctcgggtaacaaccatgcc
gacgaagacaccgccatctatgatcgcatcgaggtgatccgcggcgccaacggcctgatg
acgggcgtgggcaatccctctgccacggtcaactttattcgtaagcgcccaacggctgac
aatcagcttaatctgcaggccagctacggcagcttcaacaaccttagggtggaggccgat
gccagtggccgccttaacgacacctttgacgggcgcgtggtggcagtgaaacagacaaag
gagtcttacctcgatcgctacgagacagataagagcgtgctctatgccttcctggaggct
aacctgagcgacgacaccagcctgtcggtcagccacagctacatcaacaacgatgctacg
ggcaataactggggcgcgctgccgctctactatacagatggcagcccaacccactacgat
agatccaccaacacctcggccgattggtctaactggcaggtgatcaagcaaaataccgtg
gtggagttaagtcactacttcggcaacgactggcgtctacgcgcgacttactctcacaag
agtaccgatgaagataccgaacttttctatgtttacggcacgcccgaccgagaaaccggc
ctgggtctcaccggctatggcagcgaatacgatctcgacgagagtcatgatctggtagat
atctatgtcgatggcgaagtcagcctgtttggccgcgagcatcagttggtcgccggggtg
aactatgccaaggtggactatatcgacacctctttatatgactacaccacgggcaacggt
ttcccggccatgccagatctcaacgactgggatggtaacacgcccaagcccatctttgcc
gacagcccccgcggcagcgacgtcagcgctaagcagcaagccgcctactttaccggtcgc
tttaacctgttcgagggcttccatcttatcgccggtggtcgcttcaataagtggcaggcc
gaaggggtctcctacagcaagctacaagatgtagaagatagccagtttatcccctacctg
ggcgccgtttatcgcatcactcctgaattagtggcctatgccagctataccgagaccttc
aagtcgcaaaccgagaaggatatcgacgataacttgctggcgcctgttacaggtgaaagt
aaggagataggtcttaagagcgagctatttaatggtcgccttatcgccagcctggcctat
ttcgacattcaacaggtcaatctggccgtgccagatccacgcactgcggatctgccgccg
accgaccagcgctacataggcgccgatggcattaacagtaagggctatgaatttgaagtc
gccggagaggtatttgatggcctcaacctgagcctgggctttaccgacttcgatattgat
ggtcacgacgaaaacgccgagatagtcgcggcctataccccaagccgcctgctcaaattc
gccgccacctacgatgtcgccgccatcgaaggcttatcgattgggatgaacatgcgctgg
caggacgatatctcgcgtcatcagggcgtggttggcgatggctttgataatgcgggcgaa
gagatcattacccggcaggacgcgtacgccatcgtcgatcttatggcccgctatcagttt
aacgagaacgttcaactgagcgtcaacgccaacaatgtgaccgatgagaaatatctcaac
agtctctattgggctcaggccttctatggcgctcccgcaaactacagcgccacccttagc
tggaagatctaa
DBGET
integrated database retrieval system
