Shewanella marisflavi: CFF01_06100
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Entry
CFF01_06100 CDS
T05400
Name
(GenBank) tRNA pseudouridine synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_06100
Enzymes [BR:
smav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
CFF01_06100
Transfer RNA biogenesis [BR:
smav03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CFF01_06100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASJ98597
UniProt:
A0A4Y6J7A7
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Position
1375426..1376259
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AA seq
277 aa
AA seq
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MNPADSALAATDRPASTDETIAEQAAPKIEILYEDEDLVVIHKPAGLLVHRSYLARREKY
FAMQMTRDMVGCHVFPVHRLDRPTSGVLLFAKSSEMANQLCEQFATKSVEKHYLALVRGN
MHTAGLLDYPLKQELDELGDKDVDPNKAAQEAQTSYRPLLNSEIPYPSGRYASSRYALVH
LTPHTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNRFMREHSGINRLWLIAKKLAFNHPRT
GERISVETELETEWLELFALLGWDETALSGEQAQLIC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
attaacccagcagattcagcattagcggcgaccgataggccggccagtacagatgaaacg
atagcagagcaggctgcaccgaagattgagatcctctacgaagatgaggacttggtggtt
attcataagccagcaggattgttggtgcatcgcagctatcttgcgcggcgggagaagtat
tttgcaatgcagatgacccgagacatggtggggtgtcatgtgtttcccgtccataggcta
gacagacccacctccggggtactcctgtttgccaagagtagtgagatggcgaatcaactg
tgcgagcaattcgccactaaatcagtggaaaagcattatctagcgcttgtgaggggtaat
atgcacaccgctggcctgctagactatccgcttaaacaggagctggatgagcttggcgat
aaagatgtcgacccaaacaaggctgctcaagaggcacaaaccagttatcggcccctgctt
aacagtgagattccttacccatcggggcgctatgctagcagtcgttatgctttagtgcat
ctgacgccgcatactggccgtaaacatcagcttaggcggcatatggcgcatttacgccat
cctattattggtgacaccacccatggcgatggtaagcagaatcgttttatgcgcgagcat
agtggcattaatcgactgtggctgatcgccaagaagctagcttttaaccatcccagaacc
ggcgaacgtatcagcgttgaaactgagttggaaaccgagtggcttgaattgtttgcgctt
ttaggttgggatgagacggcgttaagcggcgaacaagctcagttgatctgttag
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