Sphingopyxis macrogoltabida 203: LH19_13610
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Entry
LH19_13610 CDS
T04627
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH19_13610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_13610
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LH19_13610
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GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
ABC_tran
AAA_30
AAA_29
AAA_27
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
ALJ13907
UniProt:
A0A0P0DRS5
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Position
complement(2685213..2686322)
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AA seq
369 aa
AA seq
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MTLIRLSLTDFRNHAGADLAAEAGLVALHGDNGAGKTNILEAISLLAPGRGLRRAPLSDM
VRDGAGGGFAIFAEVQADRALPPVALGTGIEAAHPRRRLVRINGAAAAAASLGEWIAVLW
LTPAMDRLFVETAGSRRRFLDRLVLALDPRHAQHSNRYDAALRARGKLLADLAVADQQWL
TSLEAQLAEHGAAMDAARQSMLASLAAELAGQPDAPFARPLLTLTDSDGAARTAPHDPEA
LKAIFASRRRIDAAAGRATAGPHRDDLSAVHAATGRAAARCSTGEQKAMLLSLILAHSDC
VARLRGARPVLLLDEVAAHLDPLRRAALYDRLAGQGGQAWLTGTEAALFADMPGPVTRFR
IAGGRIAPG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgatccgcctttcgctgaccgattttcgcaatcacgccggcgcggaccttgca
gcggaggcgggactggtcgcgctgcacggggacaatggcgcgggcaagaccaatatattg
gaagcgatttcgctgcttgcgccggggcgcgggctgcgaagggcgcccctgtccgacatg
gtgcgcgacggggcgggcggcggctttgcgatcttcgccgaggtgcaggcggaccgagcg
ctgccgccggtcgcgctcggaacggggatcgaggccgcgcatccccgacgccggctggtc
cggatcaacggcgccgctgcggccgccgcctcgctcggtgaatggatcgcggtgctgtgg
ctgaccccggcgatggaccggctgttcgtcgagacggcgggcagtcgccgccgcttcctc
gaccggctggtgctcgcgctcgacccccggcacgcgcagcacagcaaccgctatgacgcg
gcgctgcgcgcgcgcggcaaattgcttgccgacctcgcggtggccgatcagcaatggctg
accagtcttgaggcacagctcgccgagcatggcgctgcgatggatgcggcgcggcagtcc
atgctggcgtcgttggcggccgagcttgccgggcagcccgacgcgccctttgcccggccg
ctgctgacgctcaccgacagcgacggcgctgcacggacggcgcctcacgacccggaagca
ctcaaggcgatatttgcatcgcggcgccggatcgacgccgcggcgggccgcgcgactgcg
gggccgcaccgcgacgacctgtccgccgttcatgccgcgacagggcgcgccgcggcgcgc
tgttcgaccggcgagcagaaggcgatgctgctgtcgctcattctggcgcacagcgattgc
gttgcgcggctgcgcggggcgcggccggtgctgttgctcgacgaggtcgccgcgcacctc
gatcctctccgtcgcgccgcgctgtacgatcggttggccgggcagggcgggcaggcgtgg
ctgaccgggaccgaagcggcgctcttcgccgacatgccgggaccggtgacgcgctttcgc
atcgccggtggacggatcgcgccgggctga
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