Sphingopyxis macrogoltabida 203: LH19_23970
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Entry
LH19_23970 CDS
T04627
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03030
DNA replication
smaz03430
Mismatch repair
smaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH19_23970
03430 Mismatch repair
LH19_23970
03440 Homologous recombination
LH19_23970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_23970
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_23970
Enzymes [BR:
smaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH19_23970
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH19_23970
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH19_23970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DUF3131
Motif
Other DBs
NCBI-ProteinID:
ALJ15946
UniProt:
A0A0P0D8Y5
LinkDB
All DBs
Position
4863500..4864198
Genome browser
AA seq
232 aa
AA seq
DB search
MREIIFDTETTGFDPKTGDRLVEIGCIELVDRRETGQSFHAYFNPERDMPAAAEAVHGLS
IQFLSDKPLFASRVDELLEFLGDAPLIAHNAVFDFGFVNAELARAGRPALDMARMCCTVQ
MARKLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAHLYIEMTGGRQIGLGLAASP
AAVPVAATAAAAPRTGARPFREPRPHVASAAELARHAEFVAGLNQPLWLDTV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagattatcttcgataccgaaaccacggggttcgatcccaaaaccggggacagg
ctggtcgaaatcgggtgcatcgaactggtcgaccgccgtgagacgggccagagcttccac
gcctatttcaatcccgaacgcgacatgcccgcggccgccgaagcggtgcacggcctgtcg
atccagttcctgtccgacaagccgctgttcgcgagccgcgtcgacgagctgctcgaattt
ctcggcgacgcgccgctgatcgcgcacaatgccgtgttcgacttcgggttcgtcaacgcc
gaactggcgcgcgccggccggccggcgctcgacatggcgcgtatgtgctgcacggtccag
atggcgcggaaactccaccccggtgcgaagcacagcctcgatgcgctctgtacgcgctac
ggcatcgatcgcagccaccgcgtcaagcacggcgccttgctcgacgccgaactactcgcg
catctttacatcgaaatgaccggcgggcggcagatcgggctcgggttggccgcctcgcct
gccgctgtcccggtcgctgcgactgccgccgccgccccgcgcaccggcgcgcgtccgttt
cgcgaaccccgcccccatgtcgcatcggccgccgaactcgcgcgccatgccgaatttgtc
gcagggctgaaccagccgctgtggctcgatacggtgtga
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