Sinorhizobium medicae: Smed_2084
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Entry
Smed_2084 CDS
T00555
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00470
D-Amino acid metabolism
smd00550
Peptidoglycan biosynthesis
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Smed_2084
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Smed_2084
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Smed_2084
Enzymes [BR:
smd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Smed_2084
Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Precursor biosynthesis
Amino acid ligase
Smed_2084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
IlvN
TrkA_N
NAD_binding_2
ADH_zinc_N
ApbA
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ABR60917
UniProt:
A6UB87
LinkDB
All DBs
Position
complement(2141181..2142572)
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AA seq
463 aa
AA seq
DB search
MIPVTSFKGRKVALFGLGGSGLATAQALVAGGADVVAWDDNPDSVAKADQAGIATADLRG
EEWHAFSALVLSPGVPLTHPKPHWSADLAHHAGVEIIGDVELFVRERRKHAPDCPFIAIT
GTNGKSTTTALIAHILRASGRDTQLGGNIGTAVLTLEPPQADRFYVVECSSYQIDLAPTL
DPTAGILLNLTPDHLDRHGTMQHYADIKERLVAGSGTAIVGVDDSLSSLIADRVERAGTK
VVRISRRHPLAEGVYAEGTALMRATGGASSLFTDLAGIQTLRGGHNAQNAAAAIAACLAV
GISEKDIVDGLRSFPGLKHRMQPVAKKGETIFVNDSKATNAEAAAPALSSYDRIYWIAGG
LPKEGGITSLTPFFPKIVKAYLIGEAAPSFAATLGEAVPYEISGTLEKAVAHAASDAARD
AGAPATVMLSPACASFDQYKNFELRGDAFVEHVKALEGVIMLI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacttcattcaagggtaggaaggtcgcactcttcgggctgggcggctcc
ggactggcgaccgcccaggcgctcgttgcaggcggagccgatgtggtggcttgggacgac
aaccccgacagcgtcgccaaggcggatcaggccgggatcgcgacggccgatctgcggggc
gaggaatggcatgccttttccgccttggtcctttcgcccggcgtgccgctgacccatcca
aagccgcattggagcgccgacctcgcgcatcatgccggcgtcgagatcatcggcgatgtc
gagctgttcgtgcgcgagcggcgcaagcacgcgcctgactgccctttcattgccatcacc
ggcaccaacggcaaatccacgacgacggcgctgatcgcccatatcctgcgcgcaagtggg
cgggacacacagctcggcggcaatataggcacagcggtgctgacgctggagccgccgcag
gcggaccgcttctatgtcgtcgaatgctcatcctaccagatcgacctggcacccacgctc
gatcccaccgccgggatactcctcaacctcacgccggatcatctggatcgccatggtacg
atgcagcactatgccgacatcaaggagcgcctggtggcggggagcggaacggcgattgtc
ggtgtcgacgacagcctttcgagtctgattgccgaccgggtggagcgagcaggtaccaag
gtcgtgcgtatctcgcgccgtcatccgcttgccgaaggtgtctatgccgaaggtacggcg
ctgatgcgtgcgactggcggggcatcgtcgctctttaccgaccttgccgggatccagacg
ctgcgtggcggtcacaatgcccagaatgccgcggccgcgatcgccgcgtgcctggcggtc
ggcatttccgaaaaggacatagtggacggcctcagaagctttccggggctcaagcaccgg
atgcagccggttgcgaagaagggcgagaccatcttcgtcaacgatagcaaggcgaccaac
gccgaggccgcagcaccggcgctgtcgagttacgaccgtatctactggatcgccggcggt
ctgccgaaggagggcggcatcacctcgttgacgccattctttccgaaaatcgtcaaagcc
tatctgatcggagaggcggcgccgtctttcgcggcgaccctcggcgaggcagtgccctac
gaaatctcggggacattggaaaaagcggttgcgcatgcggcatcggacgcggcgcgcgat
gccggggcgccggcgaccgtgatgctttccccggcttgcgcaagcttcgaccagtataag
aacttcgaactgcgcggagatgccttcgtcgagcacgtgaaggcgctcgagggcgtgatc
atgctcatctga
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