Sinorhizobium medicae: Smed_5776
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Entry
Smed_5776 CDS
T00555
Name
(GenBank) putative PAS/PAC sensor protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
smd
Sinorhizobium medicae
Pathway
smd02020
Two-component system
smd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Smed_5776
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Smed_5776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smd02022
]
Smed_5776
02035 Bacterial motility proteins [BR:
smd02035
]
Smed_5776
Enzymes [BR:
smd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
Smed_5776
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
Smed_5776
Two-component system [BR:
smd02022
]
CheA family
CheA-CheYBV (chemotaxis)
Smed_5776
Bacterial motility proteins [BR:
smd02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
Smed_5776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
HWE_HK
PAS_10
PAS_9
PAS_4
CheR_N
PAS
HisKA_2
PAS_3
PAS_8
IFT57
DUF6034
DUF2777
Syntaxin
CENP-F_leu_zip
Sec20
AAA_23
DUF3450
FapA
DUF2920
Laminin_II
IMD
UPF0242
AAA_13
zf-C4H2
OmpH
APG6_N
GAS
COG6_N
Motif
Other DBs
NCBI-ProteinID:
ABR64482
UniProt:
A6ULF2
LinkDB
All DBs
Position
pSMED02:747465..750947
Genome browser
AA seq
1160 aa
AA seq
DB search
MVQKADPPIVAIGASAGGVQALQTFFDLMPIDTGATFVVIVHLDPHARSELANILAARTR
MPVTQVEDQARLESNHVYVIAPNRRLKIADGTIAALPFEEPHALRAPIDFFFRSLAEEHR
SEFAIILTGAGADGAIGVKAIKEADGIVLVQDPDEAEYASMPRNAIATEVADFVLPIREL
PHRVAELLARRDQLPSHQFRVNDDEMIGRIVAHVRGRTGHDFSQYKRATILRRIGRRAQV
ARRETFADYYNYLRENPEEAQALFSDFLISVTTFFRDPSAFEVLAERVIPHLFDGKEVAD
KIRVWVPGCATGEEAYTIGILLLEEAARRDLSPEIQVFGSDLDEQALRIAREGRYPSTVE
GDLSEERLRRFFQREGDHYRVRRDLRDAVLFASHSLLRDPPFSHLDMISCRNLLIYLDRQ
LQQQVCNTFHYALNAGGFLFLGSSESADCPGLFRPVDREARIYRALAGAGARPMVLPALL
GPHKPEMKSTIIRTPPAGHGSDAAVHRQMLEKIAPPSMLVDESHHAIHLSENAGRFLKPS
GGPVSTAATDLVREEFRFDLRAALHRAFGRNEPTLSMPILADLDGQPHRVYLQVKPVVRG
TERTRHALVLFIEGEAIDKTQEVVLDTLDGRPTIDEAIRRLQEELQLAQNRLRLTSEESD
TATEELRAANEELQSMNEEYRSTAEELETSKEELQSINEELQTVNNELKLKLESISRANS
DLQNLMAATDIATLFLDPSLRIKRFTPRLTEIFNVTSNDEGRPITDFTHRLQYKRLSDDA
RAVLETLKPVEHEVKGRNDGWYLVRMRPYRTIEDKIDGVVVTFVDISERRHAEEAAKESG
QRLEQEMRLVELSRSPIFVWDFDDGVMQWNRGSEELYGYSREEALGRRKEELLKTGVPGS
SFDKLRRTLSQKGRWSGELNHTTKDGRVLTVESQIELVPFGERRLVLESTRDITDRKRWE
RRGQLLLNELSHRVKNTLAVVQSLARQTLRTTRSSEDFVERFEGRLAALASAHKLLVDSE
WSGAELNELARRQLDAYAASDRRRLQIEGEPVTLPPDLATPFGLVLHELATNAAKYGAFS
TGNGQIKLSWKLGNNGRSLGVIWQERGGPPVEPPSEQGFGGVLIEKSLPGSTVHRDFQPD
GVVCTIDIELPEIRPDGGEK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaaagctgatcctccgattgtcgcgattggggcttccgccgggggcgtccag
gcacttcagaccttttttgatcttatgccgattgacactggcgcgactttcgtcgtcatt
gtccatctcgatccgcacgccagaagcgagcttgcgaacattttggcggcacggacgcgc
atgccggttacgcaggtcgaggaccaggcgcgtcttgaaagcaaccacgtttacgtcatc
gcgccaaaccgtcggcttaagattgccgacggtacgatagccgcgctccccttcgaagag
ccgcatgccctccgcgcgcccattgattttttctttcgatcgcttgccgaggagcatcgg
agcgaatttgcgattattctcactggtgccggggcggacggtgcgattggggtcaaggct
atcaaggaggcggacggaatcgtgctcgtccaggatcccgatgaggcagaatatgcctcc
atgccgcgcaacgccatcgccactgaggttgcagacttcgtgctgcctatccgagagctt
cctcatcgggtggctgagttgctcgcccgccgtgatcagcttccgtcccaccagttccgc
gtaaacgatgatgagatgatcgggcgaattgtggcccatgtgcgcggccgaaccggacac
gatttctcccaatacaagcgggctacgattttgcggcgtatcggacggcgagcgcaggtt
gccaggagggagacctttgcggactactacaactacctgcgcgagaatccagaggaagct
caggcgctgttcagcgactttttgatttcggttacaacgttctttcgcgatccttcggct
ttcgaggtactggccgaaagagtcatcccacacctgtttgacggaaaagaagttgccgac
aagatcagggtttgggttccgggctgcgctaccggtgaggaggcctacacaattggcatc
cttctgctcgaggaggcggcacgccgcgacctctcgccggaaatccaggtcttcggctcg
gacctcgacgaacaggcacttcgcatcgcgcgcgagggacgatacccgtcgacggtcgaa
ggcgatctctcggaggaacgacttcgccgtttcttccagcgtgagggagatcattatcga
gtgcgccgcgatttgcgagacgcggttctgtttgccagccacagtctacttagagacccg
cccttctcccatctcgacatgatttcctgccgaaacctgctgatctacctcgatcggcag
ctgcagcagcaggtgtgcaacacgtttcattacgcgctcaacgcaggtggtttcctcttc
ctcggatcgtcggaaagtgctgactgccccggactcttccgccctgtggatcgcgaggcg
cgtatctacagggcactagcgggcgccggtgctcgacccatggtgctgccggcgctgctt
gggccacataagccggaaatgaaatcgaccattattcggacgccgccggcagggcacggc
agcgacgcagcggtacaccgccagatgctcgagaaaatcgcgcctccaagcatgctggtt
gatgaaagccaccacgcaattcatctttcggaaaatgccggacggtttctcaagccgtcg
ggaggccctgttagtaccgccgccacggatctcgtgcgtgaggaatttcgcttcgatcta
agagcagcgctgcaccgggcctttgggcggaatgaacccacgttgagcatgcccattctt
gctgacctcgatgggcagccgcaccgggtctacctgcaagtgaagcctgtggtccggggg
acggagcgtacgaggcatgctcttgtgctctttatcgaaggtgaagccatcgacaagacc
caggaggtcgtgctcgatacgcttgacgggcgcccgacgattgacgaggcgatccgccga
ttgcaggaggaattgcagctcgcgcaaaaccggcttcgcctgacgagcgaggagtcggac
actgctactgaggagttgcgggctgccaacgaagagctgcagtcgatgaacgaggaatac
cgttcgacggccgaggaactggaaacgagcaaggaagagctacaatccatcaacgaggag
ctgcaaactgtcaacaatgagctcaagctgaagctggaaagcatatcgcgcgctaacagc
gacctacagaacttgatggccgcgaccgacatcgcgacgcttttccttgacccctccctg
cgtatcaagcggtttaccccgcgtttgacggaaatatttaacgtcacttcgaacgacgaa
ggccggccgatcactgatttcacgcatcgcctccaatataagagactttctgatgacgcg
cgggcggtgctggagacactcaagccagtcgaacacgaggtgaagggccgcaacgacggc
tggtatctggtgcggatgcgcccctaccgaacaatcgaagacaagatagacggcgttgtg
gtcacgttcgtcgacatcagcgagcggcgccatgccgaagaggcggcgaaggagagcggg
caacgccttgagcaggaaatgcggcttgtcgagctttcgcgctcaccgatattcgtgtgg
gactttgacgatggcgtaatgcagtggaatcgcggcagcgaggaactctatggttattcg
cgtgaggaggcgctcggaagacgcaaggaagaactgctcaagaccggcgttcccggctcg
tcctttgacaagctcaggcgaacactcagccaaaagggccgttggagcggcgaactgaac
cataccacgaaggacggtcgcgtgctgacggtagagagccaaatagagctcgtgccgttt
ggcgagcgccgccttgtgctggaaagcacccgcgacattaccgaccgcaagcgctgggag
cggcgcgggcagctcttgctgaacgagctaagccatcgcgtgaagaacacgctcgctgtc
gtccagtcgctggcgcgacagactctccgcacaacccgatcgagcgaggacttcgtcgag
cgctttgaagggcgcctcgcggcgcttgcgagcgcccacaagctgcttgtcgactctgaa
tggagcggcgctgagctcaacgaactcgcgcgacggcaactcgatgcctacgccgccagc
gatcggcgccggctgcagatcgagggcgagccagtgacgttgccgccggacctcgctacg
ccgttcggtctcgtgctccacgagctcgcgaccaatgccgcgaaatacggcgcattttct
acaggaaacggacagatcaagctcagttggaaactcgggaacaacggccgaagcctcggg
gttatctggcaagaacgcggtggcccgccggtcgagccgccgagcgagcagggtttcggc
ggcgttctgatcgagaagagtttgccaggatctacggttcatcgcgatttccaaccggat
ggcgtcgtctgcacgatcgacatcgagcttccggagatccggccagatggtggggaaaag
tga
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integrated database retrieval system
