Sinorhizobium meliloti 1021: SMc00647
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Entry
SMc00647 CDS
T00058
Symbol
rluD
Name
(GenBank) Putative ribosomal large subunit pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sme03009
]
SMc00647 (rluD)
Enzymes [BR:
sme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SMc00647 (rluD)
Ribosome biogenesis [BR:
sme03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SMc00647 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CAC47304
RhizoBase:
SMc00647
UniProt:
Q92MA7
LinkDB
All DBs
Position
2928106..2929137
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AA seq
343 aa
AA seq
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MNDPFKQAPGNRKVLTAGDDAAGRLDAFLTEALAGEFSRNRIKSLIEQGAVSINGATVTE
PKRKVHPGDSFRIALPEPEDPEPKGEAIPLDVLYEDADLIVLVKPAGLVVHPGAGNWTGT
LVNALIHHCGDSLSGIGGVKRPGIVHRLDKDTSGVMVVAKNDAAHRHLSDQFADHGRNGP
LERAYRAVVWGRPRQLKGKIDAPLGRAGDRTKRAVKREDSDDAREAITHYEVVERYHEKP
DGTSLASTVECHLETGRTHQIRVHMAHIGHPLIGDPDYGAAFRTKANLLPEPARAAVNRF
PRQALHAFMLQFEHPATGETMHFETPVPADMQELIAALRAGAP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatccctttaaacaagcgcccggcaataggaaagtcctgacggcaggcgatgac
gcggccgggcgcctcgacgccttcctgacggaagcgcttgcgggcgagttttcgcgcaat
cgcatcaagagcctgatcgagcaaggagccgtctcgatcaacggcgcgaccgtcaccgaa
ccgaagcgaaaggttcatcccggcgactccttccggattgcactgcccgagccggaggat
cccgaacccaagggtgaggcgatcccgctcgacgtgctttacgaggatgccgacctgatc
gtactggtcaagccggccggtctggtcgtgcatccgggcgccggcaattggacgggaacc
ctcgtcaacgcgctcatccaccattgcggcgacagcctttccggcatcggcggcgtcaag
cgccccggtatcgtgcatcgcctcgacaaggacacgagcggcgtcatggtggtcgcgaag
aacgatgccgcacaccgccacctttcggatcagttcgccgaccatggccgcaacgggccg
ctcgagcgcgcctatcgcgccgtagtctggggccggccgcgccaattgaagggcaagatc
gacgcaccgctggggcgggcgggcgaccggacgaaacgggccgtcaaacgcgaagacagc
gacgatgcacgcgaggcgatcacgcattacgaggtggtcgagcgctatcacgagaaaccg
gacggcacctctctcgcctccaccgtcgagtgccatctggagaccgggcgtacgcaccag
atccgcgtgcacatggcccatatcggtcatccgctcatcggcgatccggattacggcgcg
gccttccgcaccaaggccaatctgctgccggaaccggcgagggccgccgtcaatcgcttt
ccgcgacaggccctgcacgccttcatgctgcaattcgaacaccccgcaaccggcgagacc
atgcatttcgaaacgcccgtgccggcggatatgcaggaattgatcgcggcgctgcgggcc
ggagccccttga
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