Sulfitobacter mediterraneus: JNX03_01395
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Entry
JNX03_01395 CDS
T07747
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smed03009
]
JNX03_01395
Enzymes [BR:
smed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
JNX03_01395
Ribosome biogenesis [BR:
smed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JNX03_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QRD42789
LinkDB
All DBs
Position
298589..299620
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AA seq
343 aa
AA seq
DB search
MSHRLVTFVFGEAPPSRLDKALARDVPEDANLSRTRMARLIEAGSVQINEQVVQDPRAKV
AEGDRVAIAVEEAEDSHILPEAIPLDVIFEDDDLIVINKPSGMVVHPAPGTPSGTLVNAL
LAHCGDNLSGVGGLKRPGIVHRIDKETSGLLVVAKSDAAHQGLAKQFEAHSVERYYRAVV
YGVPDANDPRLRGIKGASFEPGNILKLTTQLARHKTDRQKQAVLFNGGRHAVTRARTVER
FGMPEVIALMECWLETGRTHQIRVHMAHAGHGLVGDPTYGGKRKLPKAAMPEAAADHVRN
FPRQALHAAVLGFEHPVTKENLRFEAPLPLDMQDLLCALRSTS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccgccttgttacctttgtttttggcgaagcgccgccatcccgtcttgataag
gcgctggcgcgggatgtgccagaggatgcaaacctgtcacggacccgcatggcgcgtctg
attgaggccggctctgttcagatcaatgaacaggttgtgcaagacccccgcgccaaggtg
gccgagggggaccgggtcgccatcgcggtggaggaggccgaggacagccatatcctgccg
gaggcgatcccgctggacgtgatctttgaggatgacgatctgatcgtgatcaacaaaccc
tccggcatggtggtgcatcctgcgcccggtacgccgtcgggcactttggtcaatgccttg
ctggcccattgtggtgacaatctgtccggcgttggcggtttgaagcgccccggcattgtg
caccggatcgacaaagagaccagcggtctgctggtcgtggccaaatcggatgccgcgcat
cagggtttggccaagcaatttgaggcccattcggtggagcgctattaccgcgcagttgtc
tacggtgtgcccgatgccaatgatccgcggttgcgcggtatcaagggggcgtccttcgag
ccgggcaatattctcaagctgaccacgcaattggcccgccataagaccgatcgccagaaa
caggcggtgctgttcaacggtgggcgtcacgcggtgacccgggcgcggacggtggaacgc
tttggaatgcccgaagtgattgccctgatggaatgctggcttgagaccgggcgcacccat
cagattcgagtgcatatggcgcatgcgggacacggattggtcggcgatcccacttatggc
ggcaagcgcaagttgcccaaggcggccatgcccgaagccgcagccgaccatgtgcgcaac
tttccgcgtcaggcgctgcatgcggcggttttgggatttgagcatcctgtaaccaaagaa
aacctccggttcgaagcgccattgccactggatatgcaggatttgctttgtgccttgcgc
agtacgtcctga
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