KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr0537
Entry
C770_GR4Chr0537   CDS       T02405                                 
Name
(GenBank) DEXH box helicase, DNA ligase-associated
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
smeg  Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeg03400]
    C770_GR4Chr0537
Enzymes [BR:smeg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C770_GR4Chr0537
    5.6.2.6  RNA 3'-5' helicase
     C770_GR4Chr0537
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C770_GR4Chr0537
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: AGA05509
LinkDB
Position
complement(575890..578430)
AA seq 846 aa
MDRIDSPSPEGDALTLPAPFLRWFAEKGWRPRAHQLELLSRAEAGESTLLIAPTGAGKTL
AGFLPSLVDITRRGRIPPGAPFTGIHTLYISPLKALAVDIERNLMKPVGEMGLPVSIENR
TGDTPQGKRQRQKLNPPDILLTTPEQLALLLANGEAERFFKDLRYVVLDELHSLVMSKRG
HLLSLGLARLRRLAPRLQTMGLSATVADPMDLQRWLVAQFLAKENHAGLITVSGGAKPEI
SILRTENQVPWAGHSARYAIPDVYAAIKEHRTTLLFVNTRSQAEMLFQELWKINDDDLPI
ALHHGSLDVAQRRRVEAAMAENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQR
IGRANHRMDEPSRAILVPANRFEVMECQAALDANYVGAQDTPSIGKGALDVLAQHILGMA
CAQPFDALELYEEVISAAPYARLAWETFERAVDLVATGGYALRTYERYARIRKTKDGLWR
VSNPMVAQQYRLNVGTIVESPMLNIRMVKRNQRGSLGRGGMSLGKVEESFLEMLSPGDTF
LFSGKVLRFEGIRENECLVSQAFSFDPKVPSYAGGKFPLSTYLAAQVRKMLADPARRAGL
PDQVRDWLALQGDVSMLPRDDELLIETFPRGSRHYMVIYAFEGRLAHQTLGMLLTRRLDR
AGLKPLGFVATDYSLAVWALDDMGAAFRARAPSLGQLFDEDMLGDDLEAWLNESFLLKRT
FRNCAVIAGLIEQRHPGREKTGRQITVSADLIYDVLRAHEPDHILLEATRNDAATGLLDI
GRLGSMLKRIKGHITHRRLDQISPLAIPVMLEIGRESVHGEAQDFLLTEAADDLINEAMG
GHGTDG
NT seq 2541 nt   +upstreamnt  +downstreamnt
gtggacaggatcgattctccgtcgccggaaggcgacgccctgacgttgccggcacccttt
ctccggtggttcgccgaaaagggttggcgtccgcgcgcccatcagctcgaacttctgtca
cgcgccgaggcgggcgagagcacgcttctgatcgcgccgaccggagccggcaaaacgctc
gccggctttctgccttcgctcgtcgacatcaccaggcgcggcaggatcccgcccggcgcg
cccttcaccggcatccacacgctctacatctcgccgctcaaggcgcttgccgtcgacatc
gagcgcaacctcatgaaaccggtcggcgagatggggctgccggtgagtatcgaaaaccgt
accggcgacacgccgcagggcaagcggcagaggcagaagctcaacccgcccgacatactg
ctcacgacaccggagcagctcgcgctgcttctggccaatggcgaggcggagcgcttcttc
aaggacctgcgctatgtggttctggacgagctgcactcgctggtgatgtcgaagcgcggc
catctcctatcgctcggcctcgcgcggctgcgccgcctggcgccccgtctccagacgatg
gggctttcggctacggtcgccgatccgatggatctgcagcgctggctggtcgctcaattt
ctcgccaaggagaaccatgcggggctgatcaccgtttccgggggcgcaaagcccgagatc
tccatcctgcggaccgagaaccaggtgccttgggccgggcattcggcgcgttatgcaatc
ccggacgtctacgccgccatcaaggaacaccgaacgacgctgctcttcgtcaacacccgc
agccaggccgagatgctgttccaggaactctggaagatcaacgacgacgatctgccgatc
gctctgcaccacggctctctcgatgtcgcccagcgccgcagggtcgaggcggcaatggcc
gaaaaccgtctgcgcgccgtcgtcgccacgtcgaccctagatctcggcatcgactggggc
gacgtcgatctggtcgtccatgtcggagcgccgaagggagcaagccggcttgcgcaacgc
atcggccgcgccaaccaccgcatggacgaaccgagccgcgccatcctggttccggccaac
cgtttcgaggtcatggagtgccaggcggcgctcgacgccaattacgtcggcgctcaggac
acgccgtcgatcggcaagggtgcgctcgacgtgctggcgcagcacatcctcggcatggcc
tgcgcgcagcctttcgatgcgctggaactctatgaagaggtgatcagcgccgcgccctat
gcccggcttgcctgggaaaccttcgagcgggccgtcgatctcgtcgccacaggcggctat
gccctccgcacctatgagcgctatgcccgcatccgaaagacgaaggacgggctctggcgg
gtctccaacccgatggttgcgcagcaataccgcctcaatgtcggaacgatcgtcgagtcg
ccgatgctgaacatccgcatggtcaagcgcaaccagcgcggttcgcttggccgcggcggc
atgtcgctcggcaaagtcgaggaatcgttcctcgaaatgctttcaccgggcgacaccttc
ctcttttccggcaaggtgctgcgcttcgaaggcatccgcgagaacgagtgcctggtttcg
caggccttttccttcgatcccaaggtgccgagttatgccggcggcaagtttccgctctcc
acctatctcgcagcacaggtaagaaagatgctcgccgatccggcgcgccgcgccggtctg
cccgaccaggtcagggactggctggcgctgcagggcgacgtgtcgatgcttccgcgcgac
gacgaactcctgatcgagaccttcccgcggggcagccggcactacatggtcatctacgcc
ttcgaaggcaggctcgcccaccagacgctcggcatgctccttacccgccgtctcgaccgt
gccggcctgaagccgctcggcttcgtcgcgaccgactattcgctcgccgtctgggcgctc
gacgacatgggcgcggcgttccgggcgcgggcgccgtcgctcggccagctcttcgacgag
gatatgctgggcgacgatctggaggcgtggctgaacgaatccttcctcctgaaacgtacc
ttccgcaattgcgcggtcatcgccggactaatcgagcagcgccaccccggcagggagaag
accgggcggcagataaccgtttccgccgacctcatttacgacgtattgcgcgcgcacgag
ccggatcacattctcctcgaggcgacgcgcaatgatgcggccacgggacttttggacatc
ggccgcctcggctccatgctcaagcggatcaagggccatatcacccaccgcaggctcgat
cagatctcgccgcttgccataccagtcatgctggagatcgggcgggaatcggtgcatgga
gaagcacaggacttcctgctcacggaagcggccgacgatctgatcaacgaggcgatgggc
ggtcacggtacggatggatga

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