Streptococcus merionis: SAMEA4412692_0472
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Entry
SAMEA4412692_0472 CDS
T07119
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
smen
Streptococcus merionis
Pathway
smen03030
DNA replication
smen03430
Mismatch repair
smen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4412692_0472 (holA)
03430 Mismatch repair
SAMEA4412692_0472 (holA)
03440 Homologous recombination
SAMEA4412692_0472 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smen03032
]
SAMEA4412692_0472 (holA)
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_0472 (holA)
Enzymes [BR:
smen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4412692_0472 (holA)
DNA replication proteins [BR:
smen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4412692_0472 (holA)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4412692_0472 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF3969
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
SNU86999
UniProt:
A0A239SP11
LinkDB
All DBs
Position
1:513259..514287
Genome browser
AA seq
342 aa
AA seq
DB search
MLAIEAVETLNRDNLPALTVLTGDDLGQFTQIKDCLLQKIAYDPSDLTQTYFDVREANFD
EISMDLESLPFFADGKIVILDQLLDVTTAKKRFLSDVQLARLEAYLEAPVDTTKLIVLAP
GKLDSKRRIVKLLKRDALIFEAAEPKEAELRAYYHKALQKMGFTMESSSFERLLVKSNFD
FSQIGQNLALLMAYKGPGQITLEDIEVVIPKSLQDNIFDLTQTALKGQMEMARQLVKDLT
LQGEDEIKLIAIMLNQLRLFVQVKILQDQGKTETQMVSLLSDVLGRKVNPYQVKYALRDS
RHLPMSKLQKALLTLIETDYQIKTGLNDKAYLFEIALLKIAS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttagccattgaagctgttgagacattaaatcgcgataatctgccggccttgactgtt
ttgacaggggatgacttagggcaatttacccagattaaggattgtctccttcaaaaaatt
gcctacgatcccagcgatttgactcagacttattttgatgtccgtgaggctaattttgat
gagattagcatggatttggagtctttacctttctttgcggatggaaaaatcgtcattttg
gatcagttgttggatgtgacgaccgctaagaaacgatttctttcggatgtccaattagca
cgcttggaagcttatttggaagcgccagttgacacgactaagctgatagtattagcgcca
gggaaacttgatagcaagcgccgtatcgtcaagctactcaagcgagatgccttgattttt
gaagcagcagagcccaaagaagctgagttaagagcttattatcataaagctttgcagaag
atgggctttaccatggagtcctctagttttgagaggctactggtaaagtctaactttgat
tttagccaaatcgggcaaaaccttgctctcttgatggcttacaagggaccaggacaaatc
acgcttgaggatatcgaagtagtgattccaaaaagcttgcaggataatatttttgaccta
acccagacggctctaaaagggcagatggaaatggcccgccagttggtcaaggatctcaca
ttacaaggtgaggatgagatcaagctgattgctattatgctcaatcagttacgactgttt
gtgcaagtcaagattttgcaagatcagggtaagacggaaacccagatggtatcgttattg
tctgatgtcttagggcgtaaggtgaatccttatcaggtcaagtacgccctcagagacagt
cgtcatctaccgatgtctaagttacaaaaagctctattgaccttgattgagacagattac
caaatcaagacaggcctcaatgacaaagcttacctttttgaaattgccttactcaaaatc
gcgtcatga
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