Silurus meridionalis (southern catfish): 124389318
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Entry
124389318 CDS
T08004
Name
(RefSeq) protoheme IX farnesyltransferase, mitochondrial
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00190
Oxidative phosphorylation
smeo00860
Porphyrin metabolism
smeo01100
Metabolic pathways
smeo01240
Biosynthesis of cofactors
Module
smeo_M00154
Cytochrome c oxidase
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
124389318
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
124389318
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smeo01006
]
124389318
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124389318
Enzymes [BR:
smeo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
124389318
Prenyltransferases [BR:
smeo01006
]
Compound prenylation
Protoheme farnesyltransferase
124389318
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
124389318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
124389318
NCBI-ProteinID:
XP_046710640
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All DBs
Position
7:complement(22596639..22647325)
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AA seq
437 aa
AA seq
DB search
MFKTPCGRAAGLIGAGVNPTRVINTPRTQRSIRTLVQLCRSDPAQWITFQHLRFLKRQYV
KASGVLSQRTRPKQEPVSSTLEERDDPVLGQIQEIAHVKPVPAVTATRTGAEPEAVRQAR
IEARQWKELSVNFSELPGIYARLSKIKLTALVVTTAAAGYAMAPVPFDPITFTLATVGTG
LSSCMANSINQYFEVPFDSNMNRTKNRPLVRGQISPLHAVSFALACGIPGVTLLTLAVNP
LTGFLGALNIFLYTCCYTPLKRLSIINTWVGSVVGAIPPIMGWTAATGALDPGALLLGAF
LYSWQFPHFNALSWNLREDYSRGGYRMMSVTHPALCRRVALRHSVSLIGLSTLGPVLDVT
TWTFPLVSLPINLYISYLAFRFYQHGERQSARKLFFCSLWHLPMLLLLALTCKKPRPVEE
AGPPGATDTAIALHASS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagacgccgtgtggccgtgcagcaggtctgattggcgccggcgtgaacccgacg
cgtgtgatcaacacccccagaactcagaggagcatccggaccctagtgcagctttgcagg
agcgaccctgcgcaatggatcaccttccagcacctgcgattcctcaaacgacagtatgtg
aaggcgagtggggttctgagccagcgaacgcggccgaagcaggagccggtgagctctacg
ctggaagaaagagatgatccggttctcgggcagattcaggagatcgcacacgttaaaccc
gtacccgccgtaacagccacgaggaccggcgccgagcccgaggcagtcagacaggctcgg
atagaggcgcggcagtggaaggaactgagcgttaacttctcggagttaccagggatctac
gctcggctctctaaaatcaaactcactgcgcttgtggtcacgacggcggcggcgggctac
gccatggctcctgtgccctttgacccaatcacctttacactggccacagttggaacaggg
ctctcttcatgcatggccaattctattaaccagtatttcgaggtgccctttgattccaac
atgaaccggacaaaaaaccgaccgttagtccgaggacaaataagccccctccatgccgta
tcattcgctctggcttgcgggatccccggcgtgaccttgctgactctggccgtgaacccg
ctgacaggcttcctgggggctctgaacatcttcctgtacacgtgctgttacaccccactg
aagcgtctcagcatcatcaacacatgggtgggctcggtggtgggggcgattcctcccatc
atgggctggaccgctgctacaggcgctcttgatccaggtgctctgctcctgggcgcgttc
ctctactcgtggcagttccctcacttcaacgctctgagctggaacctgagagaggactac
tcacgcggcggctaccgcatgatgtccgtcacgcaccctgcactgtgcagacgcgtggcc
ctccgtcacagcgtctccctgatcggcttgtccacgctcggccccgtgctggacgtcacc
acctggactttcccgctcgtctctctgcccatcaacctgtacatcagctacctggccttc
cgattctatcagcacggagagcgccagagcgcccgcaagctcttcttctgtagcctttgg
cacctgcccatgctcctgctgctcgccctgacctgcaagaaaccacgccccgtggaggag
gcggggccacccggggccaccgacacggctatcgcgttacacgcttcctcataa
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