Silurus meridionalis (southern catfish): 124391171
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Entry
124391171 CDS
T08004
Symbol
dennd1b
Name
(RefSeq) DENN domain-containing protein 1B isoform X1
KO
K20160
DENN domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124391171 (dennd1b)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124391171 (dennd1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
124391171
NCBI-ProteinID:
XP_046713525
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Position
9:complement(23368443..23468943)
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AA seq
745 aa
AA seq
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MDSRTRENPDRTFDLVLQVACPSSENEDPTVLWKFPQDFRDQEVLQTVPKFCFPFDVERV
SQNQVGQNFTFVLTDIESKQRFGFCRLTSGCKVCICLLSYLPWFENYYKLLNTLADYLTK
HQENELSDVLDKLYRMAVPKPNTAITLSMHLRFFAPDITGLPTIPENRNLTEYFVAVDVN
NMLHLYASMLHERRIIITSSKLSTLTACVHGSASMLFPMHWQHIYIPVLPPHLLDYCCAP
MPYLIGVHLSLLERVKSRSLEDVIILNVDTNTLESPADDLHNLPSDVVSSLKSKLKKQST
ATGNGVARAFLRSQAALFGSYRDALRYKPGEPITFCDESFVAHRSTSMKTFLEMAVNLQL
FKQFIDGRLAKLNEGRGFTDVFEEEITEGGFCGSNSRSYQQWMHTVKRGVTKASPAVKSA
YRIAKVHAKKGFRGVKDRIRLKDAEEEAGVYSAGSPTSTKSLSPRRLQKRRYQQENSHRI
ADFPDYPIDVDEDTVSKISEDSGDVSYCLEDSDDSCELEHEAGQTGQMNLLEEILDSLST
TALDHGSRLSAAKSLDFFRSMEELDCSPTNTSLAKTIPVQNCELGTATSGEQSGWNMGQD
DSAINGKHLPPSPRRHCSTRSLPASSTKPYETHQDTRNCLSEPSTQSLSESTSPPVHLEL
PSDLKLSTEAEVSSGLRRKVLSKEAIRQYQERSQQGGSNRQPSMLIPWEKESKGDDKEIN
EDVALEKGLLEEIECRLGSALSSNL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagaacacgtgagaatccagatcggacgtttgatttggtgctgcaggtggca
tgcccgtcatccgaaaatgaagatccaacagtgctgtggaagttcccccaggactttcga
gaccaggaggtcttgcagacggtgcccaagttctgtttcccatttgatgtcgaaagagtt
tctcagaatcaagtgggtcagaacttcacgttcgtgctgaccgacattgagagcaagcag
aggttcgggttctgccgcctcacctccggctgcaaggtgtgcatctgccttctcagctat
ctaccctggtttgagaattactacaagctgctaaacaccctcgcagactacttaacgaaa
caccaggaaaatgaactgagcgacgttctggacaagctgtacaggatggccgtgccgaaa
cccaacacggccataaccctgagcatgcacttgcgcttctttgccccggatatcaccgga
cttccgaccatccctgaaaacaggaatctaacggagtactttgtggcggtggacgtgaac
aacatgctacacctgtacgccagcatgctgcacgagcgacgcatcatcattacctcgagt
aagcttagcactttaaccgcatgtgtgcatggctcagcttccatgctcttccccatgcac
tggcaacacatctacatccctgttcttcccccacacctgctggactactgctgcgcgccc
atgccgtatctgatcggagttcatctgagcttgttagagagagtgaagagcaggtccctg
gaagatgtcatcattttgaatgtggacacgaacacgctcgagagtccagccgacgacctg
cacaacctgcctagcgatgttgtctcgagtctgaagagcaagctgaagaagcagtcgact
gccacgggcaacggagtggctcgggccttcctgcgctctcaggctgcgctgttcggctcc
tatcgggacgctctgagatacaaacccggagagccaatcaccttctgcgatgagagcttc
gtggcacaccgttccacctccatgaagactttccttgagatggctgtgaacctgcaactc
ttcaagcagttcattgatggcagactggccaaattaaatgaaggaaggggtttcacagac
gtctttgaggaagagatcacagaggggggcttttgtggaagtaattctagatcttaccaa
cagtggatgcatactgtgaagagaggtgtgacgaaggcgagcccagctgtgaaatctgct
tataggattgcgaaagttcatgcaaaaaaaggtttccgcggcgtgaaggaccggatacga
cttaaggacgctgaggaggaggctggggtgtactctgcaggttctcccaccagcactaaa
agcctctctccaaggaggcttcaaaagagaaggtaccaacaggaaaattcccataggatt
gccgactttccagattatcccattgatgtggacgaggacacagttagcaaaatctcagag
gacagcggagacgtgtcatattgtctagaggacagtgacgactcgtgtgagttggagcat
gaggcgggacagacgggtcaaatgaacttactggaagagatcttagactcactaagcaca
accgcattagatcatggctccagactctcagctgccaagagcctcgatttcttcaggtcc
atggaagagctggactgcagtcccacgaacacgtccctagcgaagactattccagtgcaa
aattgtgaattgggcactgccaccagtggagaacagagtggctggaacatgggccaggac
gacagcgccataaacggcaagcacctccctccttctcctcgccgccattgcagcactcgc
tcgctgccggcttcttcgaccaaaccctacgagacccatcaggacacaaggaattgtctc
agcgagccttccacccagtccctgtccgagagcaccagccctcccgtccacctcgagctt
ccctcggacctgaagctcagcaccgaggccgaggtttccagtggcctacggaggaaagtc
ctgtccaaagaggctattaggcaataccaggagcgttcacagcaagggggcagcaacagg
cagccctcaatgcttattccttgggaaaaagaaagcaaaggcgatgacaaagagatcaac
gaagacgtggcactggaaaaaggcttgctcgaggaaatcgagtgtcgcttgggttccgcg
ctgagctccaacttgtaa
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