Silurus meridionalis (southern catfish): 124397214
Help
Entry
124397214 CDS
T08004
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124397214 (tsen54)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
124397214 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
124397214
NCBI-ProteinID:
XP_046722692
LinkDB
All DBs
Position
14:complement(17546080..17558934)
Genome browser
AA seq
510 aa
AA seq
DB search
MDAENVQPALVPIDFSNELLSSSELFQRRSQSHKIPVRGQKDFLPNDSVQQKACLEKILE
EHWMLVTEERVERVGNLVNAEWIPEEKLVKLLTPAGKFWQTMGFSDQGKQCLFPEEALYL
MECGNLQVFYQDLPLSIQEGYESFLSDETVTYLEYQVFSHLKRLGYVLNRLDARSPSLYK
QQLNQPPFSNRSSKHRKRKWSQSPSFRLCNKKSTSSPEVSSGDQKGEIMTSVFLEAPGNL
QTKQAFQDETLNSDPESVKAPWRNWWTNTSNEPQPDSLNPSELYWDFSCIFFPDLGSNSA
NCACLPPPDPSLLPGDLHVPECKLAHWHRNINLKKEHLSKQQQQRDQNRHRCNINDDQEV
SQCRNWVEYLELMEKRRNQQQSERLTNFDKHEVMPLAQPRKCSSHRELLEQVSIIQSYDL
LVGKPRLSDSDQWGITFNVYQPDIEFKKSYPGKPYTRLCVSSFDGPVPNLHVLKQLSFQS
GDVPVTFAVVDHGDISFYCFKEFKLPTDVY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggaaaacgttcagcctgcattagttccgatagatttcagtaatgagttgctg
agttcatcggaattatttcaaagacgaagccaaagtcacaagattcctgtgaggggacaa
aaagactttttgccaaatgactctgtgcagcaaaaggcatgtttggagaagatccttgaa
gagcactggatgcttgtgacagaggaacgagtggagcgagtcggaaaccttgtaaatgca
gaatggattcctgaggaaaagctagtgaagctacttactccagcaggaaagttttggcag
acaatgggattttctgatcaaggaaagcagtgtttgtttccagaggaggctctttaccta
atggaatgtggcaatttgcaagtgttctaccaggatcttcctctctccattcaggaaggt
tatgaaagtttcctttctgatgaaactgtgacataccttgagtaccaggtgtttagtcat
ttaaagagactcggatacgtgttaaaccgattggatgctaggtcaccctctttatataaa
caacagctgaatcagcccccattcagcaacagatcaagcaagcaccgaaagaggaaatgg
agccagagtcctagttttagactgtgtaataagaaaagtacttcatctccagaggtatct
tcgggagatcaaaaaggtgaaattatgaccagtgttttcttggaagccccaggcaaccta
caaacaaaacaagcttttcaggatgagacattaaactctgatccagaatcagtcaaagct
ccatggaggaactggtggacaaacacatcaaatgaaccccagcctgattcattaaatcct
tcagaattgtactgggacttcagctgtatcttttttccagacctgggttcaaatagtgcc
aactgtgcatgcctgccccctcctgatcccagcttgctgcctggtgatctgcatgtacct
gagtgcaaattggctcactggcacagaaatataaatttgaaaaaggaacatctgtccaag
caacagcagcagagagatcaaaaccgacacagatgcaacattaatgatgaccaagaggtg
agtcagtgcaggaactgggttgagtatttagagctgatggagaaaagaaggaaccagcag
caaagcgaaaggctaacaaacttcgacaaacatgaggttatgcctcttgcccagcccaga
aagtgcagctcacatcgtgagcttctggagcaagtcagcattattcagtcttatgatttg
ctggtaggaaaacccaggctctctgactcagaccagtgggggatcactttcaacgtttac
cagcccgacattgagtttaagaagagttacccaggaaagccctatacccgattgtgtgtt
tccagttttgatggtccagtcccaaacttgcatgtcttaaagcagctgtcctttcaaagt
ggagatgtgcctgtgacatttgcagttgtggaccatggagacatttcattctattgcttc
aaggagttcaagctgcccactgatgtctattga
DBGET
integrated database retrieval system
