KEGG   Sinorhizobium meliloti Rm41: BN406_03040
Entry
BN406_03040       CDS       T02332                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
smi  Sinorhizobium meliloti Rm41
Pathway
smi00300  Lysine biosynthesis
smi00470  D-Amino acid metabolism
smi01100  Metabolic pathways
smi01110  Biosynthesis of secondary metabolites
smi01120  Microbial metabolism in diverse environments
smi01230  Biosynthesis of amino acids
Module
smi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:smi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BN406_03040 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BN406_03040 (dapF)
Enzymes [BR:smi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BN406_03040 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: CCM69085
LinkDB
Position
complement(3156414..3157319)
AA seq 301 aa
MGDQVQFARMNGLGNKILVVDMRGRKDRVTPQAAIALNADPATEFDQIMAIHDPKSAGTD
AWIDIVNSDGSMAQACGNGTRCVVQALAAETGRKAFLFHTVAGLLEAKEHDNGTISVDMG
KPRFGWDQIPLAEEFHDTRRIELQIGPIDAPVLHSPSVASMGNPHAIFWVENDVWSYELD
RFGPLLENHPIFPERANISIARIRSRQEMDLRTWERGAGLTLACGSAACAAAVNGARTGR
TERMVTVNVPGGPLKIEWRERDDHVIMTGPAEWEWSGTVDPVTGIFARNEPESGDNGARA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggcgatcaggtgcaatttgccaggatgaacgggcttggaaacaagatcctggtggtg
gacatgcgcgggcgcaaggatcgcgtgacgcctcaggcagcgatcgcgctcaatgccgac
ccggcaaccgagttcgaccagatcatggcgatccatgacccgaagtccgccggcaccgat
gcctggatagacatcgtcaattccgacgggtcgatggcccaggcctgcggcaacggcacc
cgatgcgtcgtgcaggcgcttgcggccgagaccggcaggaaagccttcctgttccatacg
gtcgcgggacttctcgaagcgaaggaacacgacaacggcacgatctcggtcgatatggga
aagccgcgtttcggctgggaccagatcccgctcgcggaggaattccacgacacgcggcgc
atcgagctgcagatcgggccgatcgatgcgcccgtgctgcattccccctcggtcgcatcc
atgggcaatccgcatgcgatcttctgggtcgagaacgatgtgtggagctacgagctggac
cggttcggaccactcctcgagaaccatccgatcttccccgagcgcgccaacatctcgatc
gcccgcatccgctcccgccaggagatggaccttaggacctgggaacgcggcgccggcctg
acgcttgcctgcggttcggccgcctgtgccgccgccgtcaacggcgcgagaaccggccgg
accgagcggatggttaccgtgaacgtgcccggcggtccgctcaagatcgaatggcgcgag
cgcgacgaccacgtcatcatgaccgggccggccgaatgggaatggtccggcaccgtcgat
cccgtcaccggcatctttgcacgcaacgagccggagagcggcgacaacggagcgagagcc
ctttga

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