Sinorhizobium meliloti Rm41: BN406_03148
Help
Entry
BN406_03148 CDS
T02332
Symbol
gyrB3
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
smi
Sinorhizobium meliloti Rm41
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smi03032
]
BN406_03148 (gyrB3)
03400 DNA repair and recombination proteins [BR:
smi03400
]
BN406_03148 (gyrB3)
Enzymes [BR:
smi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BN406_03148 (gyrB3)
DNA replication proteins [BR:
smi03032
]
Prokaryotic type
DNA Topoisomerases
BN406_03148 (gyrB3)
DNA repair and recombination proteins [BR:
smi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN406_03148 (gyrB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCM69193
LinkDB
All DBs
Position
3294343..3296778
Genome browser
AA seq
811 aa
AA seq
DB search
MTDISETEAGAIAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVSLKLKIRRAGKIHEMSFTHGVADGPLKVTGDAGGETGTEVTF
TPSEQTFSNIEFEFGTLEHRLRELAFLNSGVRIVLTDKRHSDIRREEMMYDGGLEAFVAY
LDRAKKPLVQKPVSIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGA
LTRQITSYADTSGITKKEKVSLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSVWLEEHPSDAKILVGKVVEAAAAREAARKARELTRRKGALDISSLPGKLA
DCSERDPAKSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVARGKSVQYLKDEKALEDYLISMGLEEASLELASGEVRVGQDLREVINDALR
LRSLMEGLHSRYNRSVVEQAAIAGALNVELNGERDEYQLIAAEVARRLDVIAEETERGWE
AAVTAEGGLKLERMVRGVKEAAVLDMALIGSSDARHIDQLKARLKEVYGAPPVLRRRDGT
QEISGPRALLDAIFAAGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVTDATDA
DGLFSRLMGDEVEPRRDFIQENALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatttctgagaccgaagccggcgcaatcgccgaatatggtgccgattccatc
aaggtgctgaaaggcctcgatgccgtgcgcaagcgcccgggcatgtatatcggtgacaca
gacgacggctcgggtctgcaccacatggtctacgaggtcgtggacaacgcgatcgacgag
gcgcttgccggccatgcggacatcgtgaccgtcacgctcaatcccgacggatccgtcacg
gtgacggacaacggccgcggcataccgacggacatccaccgggaagagggcgtctcggcg
gcggaagtcatcatgacgcagcttcatgccggcgggaaattcgaccagaattcctacaag
gtctccggtggcctgcacggcgtcggcgtttcggtcgtcaacgccctctccgtgtcgctg
aagctcaagatccgccgggccggcaagatccacgaaatgagcttcacccacggcgtagcg
gacgggccgctcaaggtgacgggcgacgccggcggcgagaccggaaccgaggtcaccttc
acgccgagcgaacagaccttctcgaacatcgagttcgagttcggcacgctcgagcatcga
ctgcgcgaactcgccttcctgaattccggcgtgcgcatcgtgctgaccgacaagcgccat
tctgacatccgtcgggaagaaatgatgtatgacggcggtctcgaggccttcgtcgcctat
ctcgaccgggcgaagaagccgctcgtgcagaagccggtgtcgatccgcggcgagaaggac
ggcatcaccgtcgaagtcgcaatgtggtggaacgacagctatcacgagaacgtgctgtgc
ttcaccaacaacattccgcagcgcgacggcggcacgcatatggccggcttccgcggcgcg
ctcacgcgtcagatcacctcctatgccgatacatccggcatcaccaagaaggaaaaggta
tcgctcacgggcgacgattgccgcgaggggctgacggctgtgctgtcggtgaaggttccc
gatcccaaattctcctcgcagaccaaggacaagctggtgtcctcggaagtccgcccggtc
gtcgaaagcctggtcaacgaggccctgagcgtctggctcgaagaacatccttccgatgcc
aagattctcgtgggcaaggtcgtggaggcggccgccgcgcgcgaggccgcgcgcaaggca
cgcgagttgacgcgccgaaaaggtgcgctcgacatctcgtcgcttcccggcaagctcgcc
gattgttccgagcgcgatccggccaaatccgaactcttcctggtggagggcgactcggca
ggcggctcggccaagcagggccgctcgcgtgaaaaccaggcgatcctgccactgcgcggc
aagatcctcaacgtcgagcgcgcgcgtttcgacaagatgctgtcgagccaggaaatcggc
acgctgatcaccgcgctcggcacgtcgatcggcaaggacgagttcaacgccgacaagctg
cgctatcacaagatcatcatcatgacggatgccgacgtcgacggggcccacatccgcacg
ctgctgctcaccttcttcttccggcagatgccggagctgatcgagcgcggccacctctac
atcgcccagccgccgctttacaaagtggcgcgcggcaagtccgtccagtacctcaaggac
gagaaggcgctcgaagattatctgatcagcatgggcctcgaggaggcgtcgctcgaactc
gcttcgggcgaagtgcgcgtcggccaggaccttcgcgaggtcatcaacgacgcgctgcgc
ctgcgctcgctgatggaggggctccactcccgctacaatcgctcggtcgtggagcaggcc
gccatcgccggagcgctcaacgtggaactcaacggcgaacgcgacgaatatcagttgatc
gccgccgaagtggcccgccggctcgatgtcatcgccgaggagaccgagcgcggctgggag
gcagcggtgacggcggaaggcgggctgaagctcgaacgcatggtgcgcggcgtcaaggaa
gcggccgtgctcgacatggcgctgatcggttcttccgatgcccgccatatcgatcagctc
aaggcacggctgaaggaggtctatggcgctccgccggtgctgcgccgccgcgatggcacg
caggagatcagcggtccgcgcgccctcctggacgcgatcttcgccgccggccgcaagggg
ctcaccatgcagcgctacaagggcctgggcgaaatgaacgccgagcaattgtgggagacg
accctcgatccgaacgtccgttcgctgctgcaggtcaaggttaccgatgcgacggatgcg
gacggtctgttctcgcgcctgatgggcgacgaagtggagccgcggcgcgacttcatccag
gaaaacgcactgagcgtcgccaatctcgatatctga
DBGET
integrated database retrieval system
