KEGG   Breviolum minutum: v1.2.028990.t1
Entry
v1.2.028990.t1    CDS       T04349                                 
Symbol
symbB.v1.2.028990.t1
Name
(OIST) -
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
smin  Breviolum minutum
Pathway
smin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    v1.2.028990.t1 (symbB.v1.2.028990.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smin03019]
    v1.2.028990.t1 (symbB.v1.2.028990.t1)
Enzymes [BR:smin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     v1.2.028990.t1 (symbB.v1.2.028990.t1)
Messenger RNA biogenesis [BR:smin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     v1.2.028990.t1 (symbB.v1.2.028990.t1)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     v1.2.028990.t1 (symbB.v1.2.028990.t1)
SSDB
Motif
Pfam: Exo_endo_phos
LinkDB
AA seq 457 aa
MAPGRSPERGSSSSRSTSPEEDQPLVTVVRAELVRGHRPVVVSEACRFRLPGPNVKYRWL
RGPVVKPCFYHPHKMSQIKDVGRTHLCYCSKECFLKGYNEIPQTQWGTKDDVEKQELIAE
WVEVANTRSYCPSKEDINRPLRLEITPLAKGGGKSTIGGMTITTGTVIPTPQEARCRRTL
TNKNESGLKWLNKQFKVMNWNVLADLYANESVYPYCEKWALSWTWRKHLIMKELKSMAVD
VITLQEVQKDAYDEWFRPQLQDAGYEGVFQHKKRDPIFHRGKYTAEGCATFYKTTRFRRV
EKHVIDYDRETSGEIRGAGLEFENDRCLQRLSKGNIALVVILEDLLIKNPNSGQAGETGG
HCLVVVNTHILCDPSSSDVKLWQSYLLVNSLRKMGWDQWPLLLAGDFNSTPESAVYEYLR
NAYVSDKHEASDKVWSLQLCENSAEFFRIFAMIHQDF
NT seq 1981 nt   +upstreamnt  +downstreamnt
caactacacaaaaaaaaatcagcttgctgcagccattgcttcagcccggaggacagaccc
catggcacctggacggagcccagaacgaggttcaagcagcagcagatctacatcccccga
agaggatcagcctcttgttacggttgtccgtgctgagcttgttcgcggacatcgcccagt
ggtggtgtctgaggcttgccgtttccgactcccaggtccgaacgtcaaataccgatggct
ccggggaccagtagtgaagccttgtttctaccatccccacaagatgtcccagatcaagga
tgtggggaggacccacctttgctactgctcgaaggaatgctttctgaagggatacaatga
aatcccgcagacgcagtggggtacgaaggatgatgtcgaaaagcaggaattgatcgctga
gtgggttgaagtggccaacacgagatcttactgccctagcaaggaggatattaatcgccc
ccttcgtttggagatcacgccgttggccaagggtggtggcaaatcaaccattggtggtat
gaccattacaactgggacagtcatcccgacacctcaagaggcgcggtgccgcaggacgct
gaccaacaagaatgaaagcggcttgaagtggcttaacaaacagttcaaagtcatgaactg
gaatgtcttggctgatctctacgcaaacgaatctgtgtatccgtattgtgagaagtgggc
actgtcttggacatggcggaagcatttgatcatgaaggagctgaagtccatggcagttga
tgtcatcactcttcaagaggttcagaaggatgcgtacgacgagtggttcaggccacagct
ccaagatgcaggctacgaaggtgtctttcagcacaagaagcgggatcccatcttccaccg
cgggaagtacacggcagaaggctgtgctactttctacaagaccacgcggttccgcagggt
tgagaagcatgttatcgactatgaccgtgagacttccggtgagattcgaggtgctggttt
ggaattcgagaatgatcgctgtcttcaacggctctccaaaggcaacattgctctggtcgt
catcttggaagatctgctgatcaagaatcccaacagtggccaggctggcgagactggcgg
tcattgcctggtagtggtcaacacccatattctttgtgatccaagctcttcagatgtgaa
gttgtggcagtcctacttgctggtgaactcgctccgcaaaatgggctgggatcaatggcc
actgcttcttgctggtgacttcaattcgacacctgagtcagcggtctacgaatatctcag
gaacgcatatgtctctgacaaacatgaggccagtgataaagtttggtctttgcagctctg
tgaaaattctgcagaattcttcaggatcttcgccatgatccatcaggacttctgagcagg
tttcgaatccacatgcgccacgacctggaattgatcactgcctatgagaaatgcactggc
tcagaggccagattcaccaactacactgaggacttcaaaggcacgctggattacatctgg
ttctccccacaggctttgaacgtggtcgcggtaacagctgtggacgatgaaggagaattg
aagaaggaacatgccctaccttcaagcaatcgaccgtcagatcacgtgtcacttgtggct
acgtttatgttcaaagaagcgcacgagcataaggcccaagcgcggcttatgagcagcacc
cacacgtaccaccacatggctggtctcaccggaccaggaggaggatgggatcaatactgc
atgagttagctccacagcaccaaagctggagagcgaatcgatgaagaagtgcaaactagt
ggctaatgaaagttcagtgcccccgaggactgattggcggcttttgagccacaaaaaaaa
tactgtcttctagtggctccagactgccccggtgatacgaatcgatggcagaattggaaa
g

DBGET integrated database retrieval system