Schistosoma mansoni: Smp_138780
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Entry
Smp_138780 CDS
T01095
Name
(RefSeq) histone deacetylase,putative
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smm01009
]
Smp_138780
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_138780
04131 Membrane trafficking [BR:
smm04131
]
Smp_138780
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_138780
Enzymes [BR:
smm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Smp_138780
Protein phosphatases and associated proteins [BR:
smm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Smp_138780
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
Smp_138780
Membrane trafficking [BR:
smm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Smp_138780
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
Smp_138780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
8349742
NCBI-ProteinID:
XP_018645480
LinkDB
All DBs
Position
3
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AA seq
171 aa
AA seq
DB search
MRSEACGYCIFNNIAITAASLLQSKKSITKHNFTYLQRILIIDWDVHHGQGTQYAFYDDN
RVLYISIHRYEKAKFWPNLREANYDFIGENLGKGYNVNIPLEETGMTDSDYLAIFYRLIM
PIATEFNPQLILISCGFDAAIGCPEVSAKLMNNIYGYDQNIFLSSFLLVID
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcagaagcatgcggttattgtatatttaataatattgctattacagctgctagt
ttacttcaatcaaagaaatcaataaccaaacataattttacatatttacaacgtatatta
attattgattgggatgtacatcatggacaagggacacaatatgctttttatgatgataat
cgtgttctttacatttctattcatcgttatgagaaagcaaaattttggccaaatttacgt
gaagcaaattatgattttattggtgaaaatttaggcaaaggttataatgttaatatacca
ttggaagagacaggtatgacggattccgactatcttgctatattttatcgtctaattatg
cctattgctacagagtttaatcctcagctgatacttatttcttgtgggttcgacgcagcc
attggttgtccagaggtaagtgctaaattaatgaataacatatatggttacgatcaaaat
atatttctttctagttttctcttagttattgactaa
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