Streptococcus macedonicus: SMA_1660
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Entry
SMA_1660 CDS
T01674
Symbol
holB
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
smn
Streptococcus macedonicus
Pathway
smn03030
DNA replication
smn03430
Mismatch repair
smn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMA_1660 (holB)
03430 Mismatch repair
SMA_1660 (holB)
03440 Homologous recombination
SMA_1660 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smn03032
]
SMA_1660 (holB)
03400 DNA repair and recombination proteins [BR:
smn03400
]
SMA_1660 (holB)
Enzymes [BR:
smn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMA_1660 (holB)
DNA replication proteins [BR:
smn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMA_1660 (holB)
DNA repair and recombination proteins [BR:
smn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMA_1660 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
SL4P
Motif
Other DBs
NCBI-ProteinID:
CCF02951
LinkDB
All DBs
Position
complement(1615257..1616132)
Genome browser
AA seq
291 aa
AA seq
DB search
MELEHLQPQLFKEFNQILKSDRMNHAYLFSGDFASFDFALYLAKSRFCKNLQDGLPCGEC
RECQLIAENEFSDVKIVKPSGQVIKTDMIRELMRNFSRSGFEGKSQVFIIQDCEKMHVNA
ANSLLKFIEEPQSSSYMILLTSDENKVLPTIKSRTQIFRFPKNKPLLIEQAEKAGVLKTQ
AEILAELAKTPKDLDELMQDKKILDVIQTCERFVTVLFKEKMLAYLETGRLVQVALEKSD
QEFVFQLLPLFLAKQFKQKESLLYLEKSYKAQQMWKSNVSFQNVLEYMVIS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaattagagcacttgcaaccccaactttttaaagagtttaatcagattttgaaatca
gataggatgaaccacgcctatcttttttcaggggattttgcgagctttgattttgctctt
tatcttgctaaaagtcgtttttgcaaaaatctccaagatggtttgccatgtggagaatgc
cgtgagtgtcagttaattgctgaaaatgaattttcggatgttaagattgtcaaaccaagc
gggcaagttatcaaaactgatatgattcgtgaattgatgcgcaatttctcacgttcaggt
tttgaaggtaaatcacaagttttcatcattcaagattgtgaaaaaatgcatgttaatgct
gcaaatagccttttgaaattcattgaagagccgcaaagttcttcctacatgattttgttg
actagtgatgaaaataaggttttgccgacgattaaaagtcgaacacagattttccgtttt
ccgaaaaataagccgctgttgattgagcaagctgaaaaagctggagttttgaaaacacaa
gcagaaatattagcagaattggcaaaaacaccgaaggaccttgatgaattgatgcaagat
aaaaaaatattggatgtcattcaaacttgtgagcgttttgttacggttctgtttaaggaa
aaaatgctagcttatttagaaacagggcgtttggttcaagttgctttagaaaaatctgac
caagaatttgtttttcaactcttgccgctattcttagccaagcaatttaaacaaaaagaa
agtttgctttatttagaaaaaagttataaggcgcaacaaatgtggaaaagcaatgtaagc
ttccaaaatgtgctagaatatatggtgatttcatga
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