KEGG   Selaginella moellendorffii: SELMODRAFT_104482
Entry
SELMODRAFT_104482 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
smo  Selaginella moellendorffii
Pathway
smo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SELMODRAFT_104482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_104482
Enzymes [BR:smo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     SELMODRAFT_104482
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     SELMODRAFT_104482
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     SELMODRAFT_104482
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     SELMODRAFT_104482
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     SELMODRAFT_104482
SSDB
Motif
Pfam: DcpS_C zf-C2HE AAA_33 Macro HIT KTI12 AAA_22 AAA_16 AAA_17
Other DBs
NCBI-GeneID: 9646016
NCBI-ProteinID: XP_002976053
JGI: 104482
UniProt: D8RXR4
LinkDB
Position
Unknown
AA seq 718 aa
MTHEKFCDGFLVFSSLAPAIIEGSASCEPNLVVVVLVGVPGSGKSRFCSSVIENASQTWT
RICQDIIANGKRGTKAQCIKQATIALNSSSSVFIDRTNLNREQRLEFIEFAKKRGVEAHA
VVLNLPVGTCITRAMNRTSHEGGLEGKKVGAVIQRMAHGVELPALEEGFSRITVCRTDGD
ADECIVAYRSLSSSSKLPTGVFDRNSSSTTKGSLEQFLNKPGGGQKKAGQASSSAASTKK
GVESAAPELKDGDGSMPQASEESCATLAFPSISTADFRFDHEKAANIIVETVSEFFSRAE
SSGLRLVLVDIDQGSDMLSRVRSKAESAGLDSRKFLVTHGDITKLHSTGGPRCSVIANAA
NWRLKGGGGGVNLAIYRAAGDDFEEATKKYAKTLDPGKVVAVPLPASSPLRTKEGVTHVI
HVLGPNMNPQRPNCIADDYSQGCRLLRQCYAALFSTFASIAKGQASKAKVTASPASNSSS
PGSSKKGKAEVGKVTGEEGNPASGTGTLKAAVEEKAATKKPVNWPAWAQALHDVAFHPEK
HSNVVLEVTDDCVVLPDLYAKAKKHLLVVSRKAGLDSIADVTNEHLPLLREMHAVGERWA
KKLVEEDNTLVFRLGYHSVPSMRQVHLHVISQDFNSPGLKNKKHWNSFTTSFFRDSRDVI
AELESRGKLEECTEEMEKRLLDSELRCHRCRCVQPNIPRLKAHVCSCSKPLPLQSLIS
NT seq 2157 nt   +upstreamnt  +downstreamnt
atgacgcacgagaaattttgtgacggttttcttgttttttctagtctagccccggccatc
atcgagggcagcgcttcgtgcgagccaaatctggtggtagtggtgctggtcggggttcca
gggagtggaaaaagccggttttgttccagcgtcatcgagaatgcttcacaaacttggacc
aggatttgtcaggatatcatcgccaatgggaagcgagggacgaaagctcagtgtatcaaa
caagccaccatcgccctcaattcctccagcagcgtcttcatcgatcgaaccaatctcaac
cgcgagcagcggctggaattcatcgagtttgcgaagaaacgcggtgtggaggcccatgcg
gtggtgctcaacttaccggttgggacgtgtatcactcgggccatgaatcggacttctcac
gaggggggactggaaggaaagaaggtcggggctgttattcaaaggatggctcacggtgtg
gagcttccagcgctggaggaaggattcagcagaatcacggtgtgtagaacagatggtgac
gccgacgaatgtatcgtggcgtacagatctttgagctcgtcatcaaagctgccaacggga
gtttttgatcgaaattccagcagcacgacgaagggatcgctggaacagtttctaaacaag
ccgggtggtggtcagaaaaaggcgggccaagcaagcagcagtgctgcgagcacgaagaaa
ggagtggaaagcgctgctccagaacttaaagatggtgatggatcgatgccgcaagcttct
gaagaaagctgcgcaactcttgcgtttccgtcaatctctacagcagatttccgctttgat
cacgagaaagctgcaaatatcattgttgagacagtgtcagagttcttcagccgtgcggag
agcagtggtttgaggctggtgctggtggatatagaccaagggtcggacatgctctcccgt
gttcgaagcaaggccgagtccgccggcttggacagccggaagttcttagtgactcatgga
gacatcacaaagctccattccaccggaggccctcgttgctcagtcattgctaacgccgca
aactggcgcctcaagggtggtggtggcggcgtgaatcttgcaatttacagagctgctggt
gacgattttgaggaagcaacgaaaaaatatgcgaaaactttggatccaggaaaggtggtg
gccgttccactgcctgcctcgtctcctctacgcacaaaggaaggggtaactcacgtcatt
cacgtccttgggcccaacatgaatccacagaggccaaactgcatcgccgacgactactcc
cagggctgtaggctgctgcgacaatgttacgctgctctcttctcgactttcgcgtccatt
gcaaaaggccaagcttccaaagccaaagtaactgcgtctcctgccagcaacagcagctcc
cctggttcttcgaagaagggaaaggctgaggtgggaaaagttacaggggaagaaggcaac
cccgcgagcggaactggaactctaaaggcagcggtggaagaaaaagccgctaccaagaag
ccagtgaactggcctgcgtgggctcaagctctgcacgacgtagcgtttcatcctgagaag
cacagcaatgtggtcctggaggtgaccgacgattgtgttgttctgcctgatctctacgca
aaggcaaagaagcatcttctagtggtgtcgcgaaaggctggattggactccatagccgac
gttactaacgagcaccttccgctcctccgcgagatgcatgctgttggcgagcgctgggct
aagaaactcgtggaagaagacaacactctcgttttccggcttggctaccactcggtacca
tcaatgcggcaggtccatcttcacgtcatcagccaggacttcaactccccggggctcaag
aacaagaagcattggaactcgttcacgacgagcttcttccgggactcgcgggacgtgatc
gcggagctggagagccgcgggaagctcgaggagtgcacagaggagatggaaaagaggctg
ctggattccgagctgcgctgccatcgctgccgttgcgtccagccaaacattccgcgctta
aaggcccatgtttgctcgtgctccaagccattgcctctccagtctctcatctcttag

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