KEGG   Selaginella moellendorffii: SELMODRAFT_114224
Entry
SELMODRAFT_114224 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
smo  Selaginella moellendorffii
Pathway
smo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SELMODRAFT_114224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_114224
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     SELMODRAFT_114224
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_29
Other DBs
NCBI-GeneID: 9647440
NCBI-ProteinID: XP_002981472
JGI: 114224
UniProt: D8SDP1
LinkDB
Position
Unknown
AA seq 975 aa
LSGEALERFGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWW
EFKAKHMDKVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLV
RKGHRVLVVEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFL
AAVTEKADNYGGSLVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLGLL
TDATQKALREQTRKPLISQLVPSKEFWDAEQTTKEIRTSYGASDVMPTVLQKILELGVSS
EPVLSAFGGCICYLRQSLLDGQLLQLGRFELLPGSDLSFEHSAAIPEAAEAHMVLDSAAL
DNLEILENSSNCGVAGTLLCLLDHCITPFGRRLLKQWIVRPLCNIESIVQRQNAVVDMQG
VAENAVSEFRRELSGIPDLERLLARLSANSGENGRHSQKVVLYEDAAKKQIKELVAALRG
FQKLVKAVSCFGNCLPQLKSARLRSLLTFGKGFPDLKPLLQYFEDSFDWSESEANGRVTG
GDHSNLSASDPREKLESYLKSQQKFFKNPEISYVTVGKDTYLLEIPEELHTKVPSDYELR
SSRKGFCRYWTPRVKELLQELSLCENEKEAALRGILQTLTKRFCDDHDHWLSAIRAVSEL
DALMSISSARLHMDGMTCLPTFVPASQLAKPVFRAKALRHPIVAVSTAASTPFVPNDVVL
GGGSNPEVMLLTGPNMGGKSTLLRQVCLGMILAQIGSEVPAESLELSLTDRLFVRMGAKD
QIMTGQSTFLIELLETAVMLRCATQNSFVALDELGRGTATSDGQAIAHAVLHYLAHNVQC
RGMFSSHYHKLASDFANDPSVSLCHMACKVGGGNNELEAVTFLYKLTSGSCPKSYGVNVA
RIAGKPKFPSHAHVSRSFHAGMPESVLRRAALQSAKLEKEVESHCHEADVIKTILDASVD
SAEQLRTAWEKAKLI
NT seq 2928 nt   +upstreamnt  +downstreamnt
ctgagtggtgaagcacttgaacgttttggcggtcgaatctcaagaaaattcagctttctt
ggcaagaaccgcaaggattcttcaggaaggcgccatgactggccaaattttgattctcga
acactttttttgccggccgagtttgtgaaagggctcacaggaggccagaggcaatggtgg
gaattcaaggccaaacacatggataaagttcttctttttaagatggggaagttctacgaa
atgtttgagatggatgcacatgttggagctcaagaccttgatctgcagtacatgaagggt
gagcagccgcattgtggcttcccggaaaagaattattttgagaatgtagagaagctagtt
cgaaaggggcatcgagtgttggtggtggagcaaacggagacaccagaacagcttgaagaa
cgcaagagaaaaacgggcagcaaagacaaggttgtaagacgtgaaatatgtgcgatcata
actaagggaaccatggtggactctggtatgattagtgacaatgcggagccctccttcctt
gctgcagtaacagagaaggcggacaattatggaggttctttggtcggactttgcgtggta
gatgcctccagggctttatttatgctcggtcaggtcgaggatgactccgcaaggacgaaa
ctcagatctatattgacagaactgaggcctgtcgaactagtcttgccgcttggcttgctg
acggacgctactcaaaaggccttacgcgaacaaacaagaaaaccattgatcagtcaactt
gtaccttcaaaagagttctgggacgctgaacagacaaccaaagagattcgcaccagttat
ggagcttcagacgtgatgcctaccgttcttcaaaaaattctcgagcttggtgtttcgtca
gaaccagttttatctgcttttgggggctgcatttgttacttgaggcaatcgcttcttgat
ggtcagctcctccagcttgggaggttcgagttgcttccaggatcggacctgtcattcgaa
cattcagccgctattcctgaagccgcagaagctcacatggtacttgacagtgctgctttg
gataacttggaaatattggaaaactcttccaattgtggagtggcagggactcttttgtgt
ttactcgaccactgcataacaccattcggaagacgtctattgaagcagtggattgtcagg
cctctttgcaatattgaatccattgtgcaacggcaaaatgccgtcgtagatatgcagggt
gtggcggaaaatgcagtttcagaatttcgacgggagctctctggtattccggaccttgaa
agacttctagctcgactcagtgcaaacagtggggaaaatgggaggcattcgcagaaggtt
gtgctgtatgaagatgctgcaaagaagcagatcaaggaactcgttgcggcacttcggggc
tttcagaaacttgtcaaagctgtatcttgtttcggcaattgtctgccgcagctcaaatca
gctcgcctgcggtctttattgacctttgggaaaggatttcctgatttgaagcctcttctg
cagtattttgaggattcctttgactggtcggagtcagaagcaaatggtcgagtaaccggt
ggtgatcatagcaacttatcggcatctgatcccagagaaaaactcgagagctacctgaag
agccagcaaaagtttttcaaaaatccagagatttcttacgtgactgttgggaaggatact
tacctgcttgagatacccgaagagctgcatactaaagtgccttcagattacgaacttcgc
tcgtctagaaagggtttctgtcgatactggacaccaagggtgaaagagctgttgcaagag
cttagcctttgtgaaaacgagaaggaagctgctctgagaggcatactccaaactcttact
aagcgcttttgtgacgatcacgatcactggctctctgctattcgagctgtttctgaattg
gatgctcttatgagcatatcgtctgcccggttgcacatggatggaatgacgtgcttgcca
acgtttgtcccagcaagtcaacttgcaaagccggtttttagagccaaagccttacgacat
cctatagtggctgttagtactgctgcaagcactccttttgttccgaacgatgttgttctc
ggtggcggaagcaatccagaggttatgcttttgacagggcccaatatgggtggcaagtcg
actttgcttcgtcaagtatgtctgggaatgatactcgcacagattggttcagaggttcca
gctgagtcgctcgagctttcccttacggatagattattcgttcgtatgggagccaaggat
caaatcatgacaggtcaaagcacattcttgattgaactactggaaaccgctgttatgctg
cgctgtgcaactcaaaactcgtttgtggctctggacgagcttggacgtggaacagcaacc
tcagacggccaagctatagcgcacgccgtgctccattatctagcacacaacgtccaatgt
cggggaatgttttcttctcactaccacaaacttgcaagcgattttgcgaatgacccttcc
gtgtctttgtgccatatggcatgcaaggttggaggtggaaataacgagctggaagcagta
acattcctctacaaactcacttctggctcttgcccgaagagttatggcgtcaacgtcgca
cgaatagcaggcaagccaaagttcccgtctcatgcacatgttagtcgctctttccatgca
ggaatgccagagagcgtgttgcgcagagccgcactacagtctgccaaactcgagaaagaa
gtggaatctcactgtcacgaagcggacgtcatcaaaaccatcctcgatgcctctgttgac
agtgcggaacaacttcgcacggcttgggagaaggcaaaacttatataa

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