Selaginella moellendorffii: SELMODRAFT_155063
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Entry
SELMODRAFT_155063 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03410
Base excision repair
smo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SELMODRAFT_155063
03450 Non-homologous end-joining
SELMODRAFT_155063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_155063
Enzymes [BR:
smo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SELMODRAFT_155063
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
SELMODRAFT_155063
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
SELMODRAFT_155063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
9636213
NCBI-ProteinID:
XP_002982398
JGI:
155063
UniProt:
D8SG82
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MWHLYEDVLGDQWRSLIYRKTVNKLRSLPYKVTSVEQIREMYGVGKSLVKMVKEILGTGQ
LQKLDNLKAQVGEIQVLGSVWGIGAIQARELYKKGFRTVKDLENYSSLTSMQRMGVKYYD
DINLRIPRDEVVDTEKFVRGVVETLAPGAWVNAAGSYRRGKPTCGDVDILITHPDGSSHQ
DLLARLVQELRRIEFIVDGLRVDANARKGGTQPDMFMGIFHFQCKAYRRIDIKVYPRHVY
AFALLAFTGNDVLNRKIRFLARVKFGYKLSDQGLFIRESKKKDSKASTESIPCETEREIF
EKLGLDYPEPHDRNW
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtggcacctctacgaggacgttttgggagaccagtggagatccctgatatacagaaag
actgtgaataagctgcgaagtttgccatacaaagtgacgagtgtcgagcagattagagaa
atgtatggggtgggaaaatcccttgtaaaaatggtgaaggagattctgggaactggacaa
cttcaaaagcttgacaatctgaaagcgcaggttggcgaaatacaagttcttggctcagtg
tggggtatcggagcaattcaggcacgagagctgtataagaaaggatttcgcactgtcaaa
gacctggagaattactcgtccctgacttctatgcagcgcatgggcgtcaagtattatgac
gatattaatttgcgaatccctcgagacgaagtggtggacaccgagaagttcgtgcgaggt
gttgttgaaactcttgctccaggggcttgggtaaatgcagcaggttcttatcgaagaggc
aagcctacttgtggcgacgttgatattctaatcactcatcccgatggttccagccatcag
gatcttctggcgagactcgtccaagaactgcgcagaatcgagtttatcgtagatggtctt
cgcgtcgatgcaaatgctcgaaagggaggtactcaacccgatatgtttatggggattttt
cactttcaatgcaaagcttatcgaagaatagacataaaagtttatccaaggcatgtgtac
gcttttgcactactcgcctttactgggaacgatgttctcaacagaaagattcgatttttg
gctcgggtaaagtttggatacaagctgagcgatcaaggactcttcatacgcgaaagcaag
aagaaagattctaaagcaagtacggaatccattccttgtgagacagagcgggagattttt
gagaagcttggtttggattatccagaacctcatgaccgcaattggtaa
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