Selaginella moellendorffii: SELMODRAFT_180168
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Entry
SELMODRAFT_180168 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_180168
Enzymes [BR:
smo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SELMODRAFT_180168
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELMODRAFT_180168
Prokaryotic type
SELMODRAFT_180168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
9654899
NCBI-ProteinID:
XP_002983413
JGI:
180168
UniProt:
D8SJ84
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MTFPKRERKRRYFSKKLEEKESDKGWHPELCTYESEFAKQHALYFYNLLAFPWEKGAFER
FVDKLERKYFPEDHIDALVPPLDKEPKAKAGKSNKDKKLSARPSSAQSSSFEAYAADASV
ENVEETSPTRPASGSIEISPDDWEPEASSPDTYAEAVSDETPKRKAADTLTPRPPVITRT
VKLPEEWDGPLGTVVLIDKPHGWTSFSVCAKLRKLLKIKKVGHAGTLDPMATGLLIVCVG
KATKFTDSYQAMKKFYSGTLRLGEATPSYDADTLVSERMPWEHVTDEDMQIVKEEFVGTI
RQVPPLYSALKVEGERLYEKARRGETFQIPPRLISIEELQVERDSIDRQNFHFKVACSKG
TYVRSLCYDLGRALNTCAHLVALRRDKIGEFSVDDAWTFSELGSNFADDFLGRACSKTSP
TTVTNMSLEDAWEFPELQESRVDDDDF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcccaagcgagaaaggaagaggaggtatttttccaagaagctcgaagagaag
gagtcggacaaagggtggcatcccgagctatgcacgtatgagagtgagtttgccaagcag
catgcgctctacttctacaacctcttggcatttccgtgggagaagggagcgtttgagcgc
ttcgtggataagttggaaaggaagtatttcccagaggatcacatcgatgctttggttcca
ccgctcgacaaggagcccaaagcgaaagctgggaaatccaacaaggacaagaaactttcc
gcaaggccatcttctgctcaaagctcgtctttcgaagcttatgcggctgatgcgtctgtt
gagaacgtcgaagagacttctccaactcgtccagcttccggttccattgagatttctcca
gatgattgggagcccgaggcgagttctcctgacacttacgccgaggctgtttctgatgag
acgccaaagaggaaagcagccgatactttaactccaagaccacctgtgataactcgaacc
gtgaagttgccggaagaatgggacgggcctcttggaactgtagtgttgatagacaagcct
catggctggacatcattttccgtgtgtgccaagctccgtaagcttctcaaaattaaaaag
gttggtcatgctgggacacttgatcctatggcgactggcctgcttatagtttgcgttggg
aaagcaactaaattcacagatagctaccaggcgatgaaaaagttttattccggaacgctg
cgtcttggagaggcaacaccatcttatgatgcagacacattggtttctgagaggatgcca
tgggagcacgtaactgacgaggacatgcagatagttaaagaagagttcgtgggcacaata
aggcaagtcccacctctgtattccgctcttaaggttgaaggagaaaggctctacgagaaa
gcacgtcgaggagagacatttcaaattcctcccagactaatcagcattgaagagctacaa
gtcgaacgcgattctattgacaggcaaaatttccatttcaaagtcgcctgctccaaagga
acgtatgtccgcagtttatgttatgatcttggccgtgctctcaacacttgtgcacatctc
gtcgcgttgcgccgggacaagattggggaattctcagttgacgacgcctggacattttcc
gagctggggagtaactttgcagacgattttttgggaagagcgtgctcgaagacttccccc
accactgtgacgaacatgtcgcttgaggacgcttgggagttcccggagctccaagaaagc
cgagtcgacgatgacgacttctag
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