Selaginella moellendorffii: SELMODRAFT_437713
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Entry
SELMODRAFT_437713 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_437713
Transfer RNA biogenesis [BR:
smo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SELMODRAFT_437713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
TrkA_N
ApbA
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
9633042
NCBI-ProteinID:
XP_002961323
JGI:
437713
UniProt:
D8QP30
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MDFLSARDEVDEEAILPDLSDEILVEQFTRNVQFFGLEGQKRVQASFVIVVGLGGVGSHA
AAMLLRSGVGKLRLIDFDQVSLSSLNRHAVATRDDVGTPKAVCLKEHFSRIYPECVIEAC
SELFDESSAEDLLSGSPDFVLDCIDNIDTKVFLIATCNKKSLRVLSATGAGARADPTRVR
IADVCESSIDPLSRAVRHRLRRLHGIESGVPVVFSMERPKAKLLPVNGVDGQEGNPSDYQ
IVPGFRVRIIPVLGTIPAIFGQVMASYTIAKLAGLQVETEPVVNLDVEHYAVLHRRLIER
EELLYGTADAVEVDKEEVAYVVRELWRGKSARNQDSHDVGRGMWRSVNKLTLTRWDHKQP
PSVSNLILLTFQEAEKHEASSVEEIKEQEPAFYAMVTETLNRGKKEF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggattttctttcggcgagagacgaagtcgatgaggaagccattcttcctgatttaagt
gatgagattctagtcgagcaatttacacggaatgtccaattttttggcttggaaggacag
aaaagagtccaagcttcgttcgtgatcgtcgttggacttggaggagtgggcagccatgcc
gccgcgatgctcctccggtctggagttggaaaacttcgcttgatcgattttgatcaggtc
tctttgtcttcgcttaatcgccatgctgtggcgacgagagacgatgttggcactcctaaa
gcagtttgtctaaaggaacatttttctcgcatttatcctgaatgcgttattgaggcttgc
agcgagctgtttgacgagtcgtcggcggaggatttactttcggggtcaccagattttgtt
ttagactgcattgacaacatcgacactaaggtttttttgatcgctacgtgtaataaaaaa
tcgcttcgagttttgtccgcgacgggtgctggggccagagctgacccgactcgcgttcgt
attgcggacgtttgtgaatcatcgatcgatcctctttctcgcgcggtgaggcatcggtta
agacgcttgcatggcatagaaagtggagttccggtggtgttttccatggagaggccgaaa
gcaaagctgctacctgtgaatggtgtcgatggacaggaaggaaatccttcagattatcaa
atagttccaggttttcgagttcgaataattcccgtgctcggaacaatcccagccattttt
ggccaagtcatggcctcttacacaattgcgaagcttgcagggcttcaagttgaaacagag
cccgtggttaatctagacgtggagcactatgctgttcttcatcgacgtctgattgaacgg
gaagagctgctttatggaacagccgacgctgttgaggtggacaaggaggaagttgcctat
gttgtccgagagctatggcgtggtaaaagcgcaaggaaccaggattctcacgatgttggc
agagggatgtggcgatcggtgaataaactgacactaacgagatgggatcacaaacagcct
cccagtgtttcgaacttaatcctgctcacatttcaagaggccgaaaaacatgaggcttca
agcgttgaagaaatcaaagagcaggaaccagctttctacgctatggtgacagaaaccctt
aatcgtggaaagaaagagttttaa
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