Selaginella moellendorffii: SELMODRAFT_84957
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Entry
SELMODRAFT_84957 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
smo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_84957
03083 Polycomb repressive complex
SELMODRAFT_84957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_84957
Enzymes [BR:
smo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
SELMODRAFT_84957
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
SELMODRAFT_84957
HDAC complexes
Sin3A-HDAC complex
SELMODRAFT_84957
BRAF-HDAC complex
SELMODRAFT_84957
REST complex
SELMODRAFT_84957
SHIP complex
SELMODRAFT_84957
MiDAC complex
SELMODRAFT_84957
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
SELMODRAFT_84957
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_84957
Chromatin remodeling factors
NuRD complex
SELMODRAFT_84957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
9652052
NCBI-ProteinID:
XP_002966032
JGI:
84957
UniProt:
D8R4E7
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MPPAKDRVSYFYDGDVGSVYYGPNHPMKPHRLCMTHSLVLAYGLHNKMEIYRPRKAYPAE
LAQFHSTDYIDFLHRITPEMQDQYAKELLMYNMGEDCPVFDNLFEFCQIYAGGTIADAAH
RLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYFPRVLYIDIDIHHGDG
VEEAFYLTDRVMTVSFHKFGDYFFPGTGDVKDVGEREGKYYAVNVPLKDGIDDSSFIRLF
RVVISKVVEFYQPGAVVLQCGADSLAGDRLGCFNLSIQGHAECVNFVKKLGIPLLVTGGG
GYTKENVARCWTVETGVLLDTELPNEIPSNDYIKYFKPDYTLKTNHGLNLDNLNTKAYLS
AIKMQVLENLRHIQHAPGVQMHEVPPDTYFPDFDEEDFNPDERLDQHTQDKSVQRDEEFY
DGDNDNDHDMDS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggcgaaggatcgagtgtcctacttctacgacggtgatgttggaagcgtctac
tatggaccgaatcatccgatgaagccccatcgcttgtgtatgacgcatagccttgttcta
gcttatggcctccacaacaagatggaaatctatagacctcggaaagcttatcccgcggag
cttgcgcagttccattctacagactacattgattttcttcacagaataactccagaaatg
caagaccaatacgcgaaagagcttcttatgtataacatgggagaagattgtccagtcttt
gacaacctcttcgagttctgccagatttacgcgggtggtaccattgcagatgctgcacat
aggcttaatcacggactctgcgacattgcaatcaactgggccggaggcttgcaccacgcc
aagaagtgcgaggcatcgggattctgctatgtcaatgacttggttcttgggattttggag
cttctgaagtacttcccgcgagtgctatacatagatatcgatattcaccatggagacggc
gttgaagaagccttctacctcactgacagagtaatgactgtgagctttcacaagttcggt
gattatttctttcctggaactggggacgtgaaggatgttggagagagagaagggaaatat
tacgctgttaatgttcctcttaaagatggaatagacgactcaagcttcatacggctgttt
cgagtagtaatatcaaaagtcgttgagttctatcaacctggggcggtggtgctgcaatgt
ggagctgattcgcttgctggagatcgcctaggatgctttaatctttccattcaagggcat
gcggagtgcgtgaattttgtgaagaaacttggcattcctctcctggtaaccggtggagga
ggatacaccaaggaaaatgttgcgcgttgctggaccgtggaaacgggtgtgcttttggat
acggagcttccgaatgaaataccgtccaacgattatatcaagtatttcaagcccgactac
accttgaaaaccaatcacggactcaacctggataacttgaatacaaaggcttatctcagc
gccataaaaatgcaagtgctggaaaatcttcgtcatatacagcatgctccaggggttcag
atgcatgaggttccgccagacacctacttcccagacttcgacgaggaggattttaatccc
gatgagcgactagaccaacatacgcaagataaaagtgtgcagcgtgacgaagagttttac
gatggcgacaacgataatgaccatgacatggattcgtga
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integrated database retrieval system