Selaginella moellendorffii: SELMODRAFT_90144
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Entry
SELMODRAFT_90144 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SELMODRAFT_90144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_90144
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_90144
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_90144
Enzymes [BR:
smo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
SELMODRAFT_90144
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SELMODRAFT_90144
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
SELMODRAFT_90144
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
SELMODRAFT_90144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
PADR1_Zn_ribbon
BRCT_2
Motif
Other DBs
NCBI-GeneID:
9651470
NCBI-ProteinID:
XP_002969183
JGI:
90144
UniProt:
D8RDE9
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MEPDHPWRAEYAKSSRAACGACHEKIDKDELRLGRMVESPKFDGWIPVWHHYSCIAVKKN
TISSIEDVDGFDNLRWGDQKKLRKYIEGKKEKGKQKTEQEEETSSFEHTIEIAKASRAIC
RVCKEKLVKGEARISTVENEKYRSPTFRHAKCFVEFFAWDQPIEELDGWDTLDESEQKCL
RPVLTENKEEIKEEKEEEQEKQQEEKKAKRQSEASGDDQSSKKKKQKVSDDFEKKMEQQT
KALWSLQDDLQRNVSLDEMKEMLEINNGAMSKSDKEIRERCADGMMFGPFKPCPQCGGPL
LYSGGMYSCQGHLSEWSRCNFKTSEVQRQAKWNIPKGSTNPFLRQASLFCLCLSCIWNKT
QKTPKEPRLLRPSTKNLNSEAHFLRGLHVFFFGAMQEKTQWKALIEEAKGVVHKTMDPGA
QGLEDWNLTSLTRRQLGIPAVAERYLTECMKMKKRLPLKDYRLESSRTSTAMTKVKVKGR
SAVHEDSEMQDKGHVLESGSVIYSVTLNKSDISTGRNSCYVLQIIEEDKGNACYVFRKWG
RVASERGHTKLEAFSKQGAIEEFEKGFLDKTGNEWHSWVRKTGFQKVPGKYYPVEIDYGA
DEAPQKELATVSGSKSNLHPRVVSLMKMLFDIETYKSAMLEFEINPNEMPLGKLTKAHIA
KGFDVLTRIQNVLKREQQDPRRQVELIDGSNQFNTLIPSTHPTLIDDEDVLKTKIQMLEA
LRDIEIASQLIKSADEDDESDPLDVHYKKLKCAVSPVPHDSPEFELVKNYLERTHAPTHT
EWGLEVEDVFVVSRDGEHDLYAPMKSTLKNRMLLWHGSRTTNFVGILSQGLRIAPPEAPA
TGYMFGKGVYFADLVSKSAQYCFTNRSNPVGLMLLSEVALGDIKEYTHAQYMEKPPAGYM
ATKGVGRTMPDPSEFKEFDDGVVVPCGRPVPSQVRSDLLYNEFIVYSTSQIQLRFLLKVR
FKYKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggagccggatcatccatggagggcggagtacgccaaatcatcgcgcgcggcctgcggc
gcctgccacgaaaagatcgacaaggatgagctgcgccttgggaggatggttgaatcgcca
aaatttgacggatggatccctgtttggcaccactactcatgcatcgcggtgaagaagaac
accatctcttcgatagaggatgtggacggattcgataacttgcgctggggagatcaaaag
aaactgcggaagtacatcgaaggaaagaaagagaaagggaaacagaagacagaacaagaa
gaggagacatcgagctttgaacacaccatcgagattgccaaggcttctcgagcgatatgc
cgagtttgcaaggagaagctagtaaaaggagaggctcgcatttccactgtggagaatgag
aagtacaggagtccgaccttcaggcatgccaagtgcttcgtggaattttttgcctgggat
cagcccatcgaggagcttgacggatgggacacgcttgatgagtcggagcagaagtgttta
agaccagtcttaacagaaaacaaggaagaaatcaaagaagagaaggaagaggaacaggag
aagcaacaggaagagaagaaggcaaagcggcagtcggaagcgtccggtgatgatcaaagc
tcaaagaagaagaagcaaaaagtgtcagacgactttgagaagaaaatggagcaacagaca
aaggcactctggagtcttcaggatgacttgcaaaggaacgtctcactcgatgaaatgaaa
gagatgctcgagatcaacaacggagccatgtctaaatcggacaaagagattcgcgagcgc
tgtgccgatgggatgatgtttggacctttcaaaccttgtccgcagtgtggcggccctctg
ctttactcaggaggaatgtactcctgccaaggccacctttcagagtggagcagatgtaac
ttcaagacatcagaagtccagcgtcaagcgaaatggaatattcccaaaggctcgacgaat
ccattcctcagacaagctagtctattttgtttatgtttaagttgtatttggaacaaaacc
cagaagacaccaaaagaaccacggctgctgaggccgtctactaaaaatctcaattctgaa
gcgcatttcctccggggacttcatgttttctttttcggagccatgcaggaaaaaactcag
tggaaggcactcatagaagaggcaaaaggtgttgtccacaagaccatggatccaggtgcg
caagggttggaagattggaatcttacaagtttaactcgcagacaactcggaattccggct
gtggcggagagatatttaacggaatgcatgaagatgaaaaagcgattgccgctcaaagac
tatcgacttgaatcttcgcgtacgagtactgcaatgacgaaagtgaaagttaaaggtcgg
agtgccgtgcatgaagactccgaaatgcaagataaaggccacgttttggaatccgggagc
gtgatatattctgtgactttgaataagtctgacatctcgactggaagaaacagttgttac
gtgctccaaattatcgaagaagacaagggaaatgcttgctatgtctttcgaaaatggggt
cgtgttgcttctgagagggggcacacgaaactggaggctttctcaaaacaaggggccata
gaagagttcgagaagggatttctggataagacggggaatgaatggcactcatgggtgcga
aagacggggtttcagaaagtcccaggaaaatattatcccgtagaaatcgactatggagct
gatgaagcacctcagaaagagttagctactgtttctggatcaaagagcaaccttcatccg
agggttgtcagcttgatgaagatgctctttgacattgagacatacaagtccgccatgttg
gagttcgaaattaatccaaatgaaatgccacttgggaaactgaccaaagcacacattgca
aagggatttgatgtgctcacccgtatacaaaacgtgttaaagcgagagcaacaagatcct
cggcgtcaagtagaacttattgacggaagcaaccaattcaacactctgatcccttcgact
cacccgactctaatagacgacgaggatgttctgaaaacgaagattcaaatgcttgaggca
ttgagggacattgaaattgcgtcgcagctcattaagtctgcggatgaagatgatgagtcg
gatccactggacgtgcattacaagaagctcaagtgcgctgtttcgccagttccacatgat
agccccgagtttgagctcgttaagaactacctggaaaggactcacgcaccaactcatacg
gaatggggactggaagtcgaggacgtttttgttgtcagtagagatggagagcacgatctg
tacgctccaatgaaatcaacgcttaagaatcgtatgctgctatggcacggttcacgcact
acaaacttcgtgggaattttgagccaaggcttacggatagcccctcctgaagcaccggct
actggctatatgtttggcaaaggtgtgtactttgcggacctggtgagtaagagcgcgcag
tactgcttcacgaacaggtccaatccagtggggctgatgctactgtccgaggttgctctt
ggagacattaaagagtatacacacgcacagtacatggagaagcctccggctggatacatg
gccacgaaaggagtcgggaggacaatgcccgatcccagcgaattcaaggagtttgacgat
ggagtcgttgtcccgtgcgggcgtcctgtgccgtctcaagttcgcagcgacttgctgtac
aacgagttcattgtgtacagtacctcacagatccagctaaggttcctgctaaaggtccgg
tttaagtacaagaggtga
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integrated database retrieval system
