KEGG   Selaginella moellendorffii: SELMODRAFT_95006
Entry
SELMODRAFT_95006  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_95006
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_95006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_95006
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_95006
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SELMODRAFT_95006
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SELMODRAFT_95006
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD zinc_ribbon_4
Other DBs
NCBI-GeneID: 9642356
NCBI-ProteinID: XP_002971047
JGI: 95006
UniProt: D8QRR8
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDQKLLLYACRNCDHQEAADNNCVYRNEVHHTADERTQVLQ
DVASDPTLPRTKDVRCSRCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaagttctgccgcgagtgcaataatattttgtacccaaaagaggatcgt
gaccagaagctgctcctgtacgcttgtcgcaactgcgatcaccaggaggctgccgacaac
aattgcgtgtatcggaacgaagttcatcacacagccgatgagagaacgcaggttctccaa
gatgttgcgtcggatcccacgcttccccgcacaaaggatgtgcgatgctcgcgatgcaag
catggagaagcagtcttcttccaggcaacagcgaggggtgaggaagggatgacgctattt
ttcgtatgctgtaatcccaattgcggctatcgctggagggattga

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