Skermanella mucosa: JL100_019160
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Entry
JL100_019160 CDS
T07652
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smuc03009
]
JL100_019160
Enzymes [BR:
smuc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
JL100_019160
Ribosome biogenesis [BR:
smuc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JL100_019160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UEM19206
LinkDB
All DBs
Position
SKMUc:4113843..4114904
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AA seq
353 aa
AA seq
DB search
MTAEEEDDIEDPDGEADPGGEPFSFTAAEADRGERLDKLLACGLDGLSRTRIRSLIDQGR
VSSLGRTIADPSLRVKPGQVFDVLVPEPEPALPVPQEIPLIVAYEDDDLLVIDKPAGMVV
HPAAGNADGTLVNALLWHCGDRLSGIGGVRRPGIVHRLDKETSGLMVVAKNDLAHAGLAA
QFADRSLSRTYRAVVAGVPSPTRGEITGDIGRSSSDRKKMAVVSGGKPALTRYRVIKAFG
TWASLVECSLATGRTHQIRVHMTHVGHPLIGDPVYGVRKNSIRSASKGIASGAASAKARG
IPEPARDAVVALGRQALHAVALRFNHPRDARPMQFESELPLDIQRLIASLESI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaagaagaggacgacatcgaggacccggacggcgaagccgatccggggggc
gagccgttcagtttcaccgcggccgaggcggaccggggcgaacggctggacaagcttctg
gcctgcgggctcgacggcctgtcgcgcacccgtatccgctcgctgatcgaccagggtcgg
gtttcgagtctcgggcggacgatagccgacccgtcattgcgggtcaaacccggccaggtc
ttcgacgtgctggtgcccgagccggaaccggcgctccccgtcccccaggaaatcccgctc
atcgtagcctacgaggacgacgatctgctggtgatcgacaagcccgccggcatggtggtc
catccggctgcgggcaatgcggacgggacgctggtcaacgccctgctgtggcattgcggc
gaccgcctgtccggcatcggcggcgtccgccggccgggcatcgtccaccggctcgacaag
gagaccagcgggctgatggtggtggccaagaacgacctggcccatgccgggctggccgcc
cagttcgccgaccggtcgctcagccggacctatcgggcggtcgtggccggagtcccctcc
cccacccggggcgagatcaccggcgacatcgggcgcagctcgtcggaccgcaagaagatg
gcggtcgtctccggcggcaagcccgcgctgacccgctatcgcgtgatcaaggcgttcgga
acctgggcgtcactcgtggaatgctccctggcgaccgggcgtacgcatcaaataagagtg
catatgacccatgttggacatcccttgatcggcgatccggtttatggtgtccgtaaaaat
agcatcaggagcgcatcgaagggtatcgcgtccggcgccgcgtccgccaaggcccgcgga
attccggaaccggcgcgggacgcggttgttgcactgggaagacaggccctgcacgccgtg
gcgctgcggttcaaccacccgcgcgacgcacgcccgatgcagttcgaatccgaattacct
ttggacatccaaaggttaatagccagcttggaatcgatttaa
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