Skermanella mucosa: JL100_019165
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Entry
JL100_019165 CDS
T07652
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smuc03021
]
JL100_019165 (rpoH)
Transcription machinery [BR:
smuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL100_019165 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_11
DUF4250
Motif
Other DBs
NCBI-ProteinID:
UEM19207
LinkDB
All DBs
Position
SKMUc:4115038..4115922
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AA seq
294 aa
AA seq
DB search
MSNTPSVPVISSEGNLARYLQEIRKFPMLEPQQEFMLAKSWREHGDTEAAHKLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIDEGDLSPEHVTQIATKLDVPEQDVVNMNRRL
ASPDHSLNAPLRADSEGEWQDWLVDEKDTQEIHLAEREELTKRRALLKSAMTNLNERERH
ILTERRLRDEPTTLEDLSQHYGISRERVRQIEVRAFEKLQKNIKNAAIEQRLAQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacactcccagcgtcccggtcatcagttccgaaggcaatctggcccgctacctt
caggaaatccgcaagttccccatgctcgagccgcagcaggagttcatgctcgccaagtcc
tggcgcgagcacggcgacaccgaggccgcgcacaagctggtgaccagccatctgcggctg
gtcgcgaagatcgccatgggctaccggggctacggcctgccgctgtcggagctgatctcg
gaaggcaatgtcggcatgatgcaggcggtcaagcggttcgacccggaccgcggcttccgg
ttggcgacctacgccatgtggtggatccgcgccgccatccaggaatacatcctgcacagc
tggtcgctggtcaagatgggcacgacggccgcccagaagaagctgttcttcaacctgcgc
aagctgaagggccagatgcaggcgatcgacgagggcgacctgtcgccggagcatgtgacc
cagatcgcgaccaagctggacgtgcccgaacaggacgtggtcaacatgaaccgccgcctg
gccagcccggaccattcgctgaacgcgccgttgcgcgccgacagcgagggcgagtggcag
gactggctggtcgacgagaaggacacccaggagatccacctggccgagcgggaggagttg
accaagcgtcgcgccctgctcaagagcgccatgaccaacctgaacgagcgcgagcggcat
atcctgaccgagcggcgtctccgggacgagccgaccacgctggaggacctgtcgcagcac
tacggcatcagccgcgagcgcgtgcgccagatcgaggtccgagcgttcgagaagctccag
aagaacatcaagaacgcggcgatcgagcagcggctggcccagtaa
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