Sphingomonas melonis: BJP26_07650
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Entry
BJP26_07650 CDS
T04509
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_07650
Enzymes [BR:
smy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP26_07650
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BJP26_07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOW23464
LinkDB
All DBs
Position
1584132..1587131
Genome browser
AA seq
999 aa
AA seq
DB search
MGGREGERAGTVEHKKRPQLFTIPAHRAFADTLVVGLMKRTGGDAMALARGLILLPNNRA
ARAVSAAFVRASGSGLLLPRLVTLGSPDLGEAVGAALDPVDDADPPPPAIAPMQRRMILA
RLVFEERAAAGAPVDAAEAVRLAGELCHTLDQLLVEEVAPERLRDLDLAPELTDHWQRAL
STFRIVLERWPGELARAGRLDAATRRRMLLDRLVTRWQTRPPAGFVCAAGVTDPAPAVAR
LLRCVAEAPQGLTVFAGLDLQMPEAEWDALGPHAPDPVTGRIRRSIETHPQFHLKLILDR
MGVGRGEVAHWPGSAGPDAGALRGRAIANALAPAAFTGKWTELKAEDRRLTGVAAVELAT
PAEEAQAIALALRGAIEEPGKTAALVTPDRALARRVSAHLRRWQIEANDTAGRPLSILPP
GTLLLALAEAAAQRFAPLALLALLKHPLVKVDPSDRALRGAWLDGTRTLDRALRGPRPAA
GLDGIMGHLLANRRDRAAAWFAEPVGLLKPIELVCDQGPQPLSSLLAVLRETAQALCGDN
LWSGPAGRAAAEFLDALEAEAAVGPPRVAPDGFPPLLRGLLDEVAVRPGSGVGHPRIAIY
GPIEARLQTADLMVLGGLNEGVWPGRPAPDPWLAPRIRAALGLAGLERSVGIAAHDFGHA
LGAPRALVTRARRDAASPALASRLWLRLQAMAGDRFVRAHDLEGWALALDDPGQHRPVVR
PEPMPGPALRPKAISVTEIDRLKADPYAFYARRVLGLMPLDPVDADPSAAWRGTAVHDIL
EQWWKQDGCAPDALVARATAMLEDERTHPMMRALWRPRLMEAVRWIADTVTAQDAEGRTV
ASAEGKGHVTIAGVTLSGRYDRVDRLADGTLAIVDYKTGKPPSAAAVRAGYSLQLGLLGA
IAERGGFQEVKGKAGGFEYWSLGKKKDQFGYIETPVDAEGKRDKIVTTEFTTIAVSNFVD
AAGTWLTGDAPFTAKLVPEYAPYAEYDQLMRRDEWYGRD
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccgggagggggagcgggccggaaccgtcgagcataaaaagcgcccgcaactc
ttcaccattccggctcaccgcgcgttcgccgacacgctggtcgtagggctgatgaagcgc
acgggcggtgacgcgatggcgctggcccgcggcctgatcctgctgcccaacaaccgtgcc
gcccgcgcggtatcggcggcgttcgtgcgggcgagcggcagcgggctgctgctgccgcgg
ctggtgacgctgggcagccccgatctgggcgaagcggtgggcgcggcgctcgaccctgtg
gacgatgccgatccgccgccgcccgcgatcgcgccgatgcagcggcgcatgatcctggcg
cggctggtgttcgaggagcgcgctgcggcgggcgcgccggtcgacgccgcggaggcggtg
cggctggcgggcgagctatgccacacgctcgatcagttgctggtcgaggaggtcgcgccc
gagcgtttgcgcgatctcgatctggcgcctgagctgaccgatcactggcagcgggcgctg
tcgacgttccggatcgtgctggagcgctggccaggtgagctggcgagggccggccggctc
gacgcggcgacgcggcggcggatgctgctcgaccggttggtgacgcgctggcagacgcgg
ccgcccgcgggcttcgtctgtgcggccggcgtgaccgatccggcgcccgcggtcgcgcga
ctgttgcgctgcgtcgcggaggcgccgcaggggctgacggtgttcgccgggctcgatctc
cagatgcccgaggccgagtgggatgcgctggggccgcacgcacccgatccggtgaccggg
cgcatccgccggtcgatcgagacgcatccgcaattccatctgaagctgatcctcgaccgc
atgggcgtcggccgcggcgaggtggcgcattggccgggcagcgccgggccggacgcgggg
gcgttgcgcgggcgcgcgatcgccaatgctctggcgccggccgccttcaccggcaaatgg
accgaactgaaggcggaggaccggcgcctgaccggggtcgccgccgtggaactcgcgacg
ccggcggaagaggcgcaggcgattgcgctggcgctgcgcggtgcgatcgaggaaccgggc
aagactgccgcgctggtgacgccggatcgcgcgctcgcccgccgggtcagcgcgcatttg
cggcggtggcagatcgaggcgaacgacacggcgggccggccgctgtcgatcctgccgccg
ggcacgctgctgctcgcgctcgccgaggcggcggcgcagcggttcgcgccgctggcgctg
ctggcgctgctcaagcatccgctggtcaaggtcgaccccagtgaccgcgcgctgcggggc
gcatggctggacgggacgcgcacgctcgatcgcgcgttgcggggcccgcgaccggcggcg
gggctcgacgggatcatggggcatctgctggccaaccggcgggatcgggcggcggcgtgg
ttcgccgagccggtcggcttgctgaaaccgatcgagctggtgtgcgatcaggggccgcag
ccgctatcatcgctgctggcggtgctgcgcgagacggcgcaggcgttgtgcggggacaat
ctgtggtcgggaccggcgggacgggccgcggcggagttcctcgacgcgctggaggcagag
gcggcggtcgggccgccccgcgtcgcgcccgatggcttcccgccgttgctgcgcgggttg
cttgacgaagtggcggtgcggccgggatcgggcgtcggccatccgcgtatcgccatctat
ggcccgatcgaggcgcggttgcagaccgccgacctgatggtgctgggcgggctgaacgag
ggcgtgtggccggggcggccggcgcccgatccgtggctggcaccgcgcatccgggcggcg
ctggggctggccgggctggagcggagcgtcggtatcgcggcgcacgatttcggccatgcg
ctcggcgcgccgcgcgcgctggtgacgcgggcgcggcgcgatgcggcgtcgcccgcgctt
gcgtcgcggctgtggctgcggttgcaggcgatggcgggggatcgtttcgttcgagcccat
gatctggaaggatgggcgctcgcgctggacgatcccggtcagcatcgcccggtcgttcgg
ccggagccgatgccgggaccggcgctgcggccgaaggcgatctccgtcaccgagatcgac
cggctgaaggcggacccttacgccttttacgcacgccgggtgctggggctgatgccgctc
gacccggtcgatgccgatcccagcgcggcgtggcgcggcactgcggtccacgacatcctg
gagcaatggtggaagcaggacggttgcgcgcccgacgcgctcgtcgcgcgcgccaccgcg
atgctggaggacgagcggacgcatccgatgatgcgcgccctgtggcgaccgcggctgatg
gaggcggtgcgctggatcgccgacaccgtgacggcgcaggacgcggaaggacgcacggtc
gcctcggcggaaggcaagggtcatgtgacgatcgccggcgtgacgctgtcgggccggtac
gaccgcgtcgatcggctggcggacggcacgctcgcgatcgtggattacaagactggcaag
ccgccctccgccgccgcggtgcgcgcggggtatagcctgcaactcgggctgctcggcgcg
atcgcggagcggggcggctttcaggaggtgaagggcaaggcgggcggcttcgaatattgg
tcgctcggcaagaagaaggatcagttcggctatatcgagacgccggtggatgccgagggc
aagcgcgacaagatcgtcacgaccgaattcaccacgatcgcggtcagcaatttcgtcgac
gctgccggcacgtggctgaccggcgatgcgccgttcactgcgaagctggtgccggaatat
gcgccttatgccgaatatgaccaactgatgcgccgggacgaatggtatggccgggactga
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