KEGG   Sphingomonas naphthae: PQ455_05395
Entry
PQ455_05395       CDS       T08850                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
snap  Sphingomonas naphthae
Pathway
snap02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:snap00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PQ455_05395 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:snap02044]
    PQ455_05395 (trbF)
Secretion system [BR:snap02044]
 Type IV secretion system
  Trb secretion system protein
   PQ455_05395 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: WCT74665
LinkDB
Position
complement(1141770..1142453)
AA seq 227 aa
MFKRPSIRYGQTTEPATPYQRAAQAWDDRIGSARVQAKNWRLAFFGTLALSGGLAGGLVW
QSTRGHIVPWVVQVDRLGEAQAVAPAEAGYRPTDPQIAFHLARFIEQVRAIPADPVIVRQ
NWLRAYDFTTDRGAMALNDHARANDPFANVGRVQVAVEVSSVIRASPDSFRVAWIERRYQ
DGSLAATERWSAILTIVVQPPRTPDALRKNPLGVFVKALNWSKELSQ
NT seq 684 nt   +upstreamnt  +downstreamnt
atgttcaagcgaccgagcatccgctacggccagacgaccgagccggccacaccctatcag
cgcgcggcgcaggcatgggacgaccgcatcggctcggcgcgcgtgcaggcgaagaactgg
cggctcgccttcttcgggacgctcgcgctttcgggcggcttggccggcggcctcgtctgg
caatcgacgcgcggccatatcgtcccgtgggtcgttcaagtcgatcggttgggcgaggcc
caagcggttgcgccggccgaagccggctaccgaccgaccgatccgcagatcgcgttccac
ctcgcccgcttcatcgagcaggtccgcgcgatcccggccgatccggtcattgtccgtcag
aactggctgcgggcctacgatttcacgaccgatcgcggcgcgatggcactcaacgatcat
gcgcgagccaacgacccgttcgccaatgtcgggcgggtgcaggtcgcggtggaagtctcg
agcgtcatccgcgcctcacccgacagcttccgcgtcgcctggatcgagcgccgttatcag
gacggcagccttgccgccaccgaacgctggtcggcgatcctcaccatcgtcgtgcagcca
ccgcgtacccccgacgccctgcgcaagaatccgcttggcgtcttcgtcaaagccctcaac
tggtcgaaggagctgtcgcaatga

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