KEGG   Sphingomonas naphthae: PQ455_05410
Entry
PQ455_05410       CDS       T08850                                 
Symbol
trbJ
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
snap  Sphingomonas naphthae
Pathway
snap02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:snap00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PQ455_05410 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:snap02044]
    PQ455_05410 (trbJ)
Secretion system [BR:snap02044]
 Type IV secretion system
  Trb secretion system protein
   PQ455_05410 (trbJ)
SSDB
Motif
Pfam: DUF948 DUF4141 Mod_r DUF3533 NPV_P10
Other DBs
NCBI-ProteinID: WCT74668
LinkDB
Position
complement(1144077..1144835)
AA seq 252 aa
MKPNILRRAMLAGAIATSSMIGITAATPAHAQFGGIVYDPTNYAQNVLTAARSLQQVNNQ
IQQIQQQATSLVNEARNLASLPFSSLQQLQQQVQRTQQLLGEAQRIAYDVQNVQQVFNGR
YKGAALTGTHAQMVANANARWADSVGAFEDALRVQAGVVGNIDGARTTMDGLVTSSQSAT
GALQAAQAGNQLLALQSQQLADLTALLAAQGRAQALDSARNAAVEAESRERLRRFLTRST
GYQPGNARMFHD
NT seq 759 nt   +upstreamnt  +downstreamnt
atgaaacccaatatcctgcgccgcgccatgctggccggcgccatcgccacgtcgagcatg
atcggcatcaccgccgccacgccggcgcacgctcagttcggcgggatcgtctatgacccg
accaactatgcgcagaacgtgctgacggccgcgcggtcgctccagcaggtcaacaaccag
atccagcaaatccagcagcaggcgaccagcctcgtcaacgaggcgcgcaacctggcttcg
ctgccgttcagctcgctccagcagttgcagcagcaggtgcagcgcacccagcagcttctc
ggcgaggcgcagcgcatcgcctacgatgtgcagaacgtccagcaggtgttcaacggccgc
tacaagggcgcggcgctcaccggcacccacgcgcagatggtcgccaatgccaatgcgcgt
tgggcggatagcgtcggggcgttcgaggacgcgctgcgcgttcaggccggcgtcgtcggc
aacatcgacggcgcgcgcaccacgatggacggcctggtcacgtccagccagtcggcgacg
ggcgcgcttcaggcggcgcaggcgggcaaccagcttctcgcgctgcaatcacagcagctt
gcggacctgacggcgctgctcgccgcgcagggccgggcgcaggcgctggattccgcgcgc
aacgctgccgtcgaagccgagagccgcgaacggctccgccgcttcctcacgcggtccacc
ggctatcagccgggcaacgcccgcatgttccacgactga

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