Sphingomonas naphthae: PQ455_05710
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Entry
PQ455_05710 CDS
T08850
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00260
Glycine, serine and threonine metabolism
snap00460
Cyanoamino acid metabolism
snap00630
Glyoxylate and dicarboxylate metabolism
snap00670
One carbon pool by folate
snap00680
Methane metabolism
snap01100
Metabolic pathways
snap01110
Biosynthesis of secondary metabolites
snap01120
Microbial metabolism in diverse environments
snap01200
Carbon metabolism
snap01230
Biosynthesis of amino acids
snap01240
Biosynthesis of cofactors
Module
snap_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PQ455_05710
09102 Energy metabolism
00680 Methane metabolism
PQ455_05710
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PQ455_05710
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PQ455_05710
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PQ455_05710
Enzymes [BR:
snap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PQ455_05710
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Paralog
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WCT74723
LinkDB
All DBs
Position
complement(1196184..1197485)
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AA seq
433 aa
AA seq
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MSIVTETKSSGFFTSSLADADPAVFAGVQHEVAREKKQIELIASENIVSKAVLEAQGSVF
TNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKQLFGCGFANVQPHSGAQANGAVMLALTK
PGDTIMGLSLDAGGHLTHGARAAMSGKWFNAVQYGVTADTHLIDYDAVEAMAKEHKPKLI
ITGGSAYPRHIDFARFRKIADEVGALFMVDMAHFAGLVAGGVHPTPFGHADIVTTTTHKT
LRGPRGGMVMTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALTPEFKAYAAAVV
ENAKVLAATLKARGAEVVSGGTDTHLALIDLTPLKVTGRDADEALERAGITCNKNGIPFD
PLPPVKTSGIRVGSPAGTTRGFGTEEFKEIGNMIADVLDGLSKNGEQGDAQVEMAVRARV
EALCDRFPIYPEL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgttaccgaaaccaagtcgagcggcttcttcacctccagcctcgccgacgcc
gatccggcggtcttcgcgggcgtccagcacgaagtcgcgcgcgagaagaagcagatcgag
ctgatcgcgtcggagaatatcgtctccaaggcggtactggaggcgcaggggtcggtcttc
accaacaaatatgccgagggctatcccggcaagcgttactaccagggctgcgcgccctcc
gatgaggtcgagcagctcgcgatcgaccgcgccaagcaattgttcggctgcggcttcgcc
aacgtccagccgcattcgggcgcgcaggccaatggcgcggtgatgctggcgctgaccaag
cccggcgacacgatcatgggcctcagcctcgatgccggcggccacctgacgcacggcgcg
cgcgccgccatgtcaggcaaatggttcaacgcagtgcagtacggcgtcaccgccgatacc
cacctgatcgactatgacgcggtcgaggcgatggcgaaggagcataagccgaagctcatc
atcaccggcgggtcggcctatccgcgccacatcgatttcgcgcgcttccgcaagatcgcc
gatgaagtaggcgccttgttcatggtcgacatggcgcatttcgcgggcctcgtcgcgggc
ggggtccacccgacgccgttcggccatgccgatatcgtcacgaccaccacccacaagacc
ctgcgcggcccgcgtggcggcatggtgatgaccgacgacgaggcgatcgccaagaagatc
aactcggcggtgttccccggcctccagggcggcccgctgatgcacgtcatcgccgccaag
gcggtggcgttcggcgaggcgctgacccccgagttcaaggcttatgccgccgccgtggtg
gaaaacgccaaggtgctggccgcgacgctgaaggcgcgcggcgccgaggtcgtctcgggc
ggcaccgacacccatctggcactgatcgacctgaccccgctcaaggtgaccggccgcgac
gccgacgaggcgctggagcgggccggcatcacctgcaacaagaacggcatcccgttcgat
ccgctgcccccggtgaagaccagcggcatccgcgtcggctcgcccgccggcacgacgcgc
ggcttcggcacggaggagttcaaggagatcggcaatatgatcgccgacgtgctcgacggc
ctctccaagaatggcgagcagggcgacgcgcaggtcgagatggccgtccgcgcccgcgtc
gaggcgctgtgcgaccgcttcccgatctatccggaattgtga
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