Sphingomonas naphthae: PQ455_07795
Help
Entry
PQ455_07795 CDS
T08850
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
snap
Sphingomonas naphthae
Pathway
snap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PQ455_07795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_07795
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PQ455_07795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
WCT75106
LinkDB
All DBs
Position
1645234..1646145
Genome browser
AA seq
303 aa
AA seq
DB search
MAARPYWQGQIRLALVSIPVQIYSATKSGATVAFHQIHEPSGKRIKYEKVVPGIGPVDPD
EILKGYEFEKGHYVLLDEDEIAAVKLESKKTLELTQFVDYDSIDPIYYDKPYYVVPADDL
AEEAFVVLREALRKTRKIGMGQLALRGREYVVSLKPCGRGLVLETLRYSDEVHRASGYFR
DIGDTKPEEDLLDLATTLIDKKAGKFDAAHFHDRYIDALKELIERKRKGRTIETDEEDAK
PAARGGNVVDLMAALKKSLEKGNAKEAPAAKAPARKAAPKKPANDTTTTRKAPAKKAPAR
KRA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgaccctattggcaaggccagatccgcctcgcgctggtctcgatcccggtg
cagatctattccgccaccaagagcggcgcgacggtcgccttccaccagatccacgaaccc
tccggcaagcggatcaaatatgagaaggtcgtgcccggcatcggcccggtcgaccctgac
gaaatcctgaagggctatgagttcgagaagggtcattacgtcctgctcgacgaggacgag
atcgcggcggtcaagctggagagcaagaagacgctcgagctgacccagttcgtcgattat
gattcgatcgacccgatctattacgacaagccttattatgtcgtgccggccgacgatctg
gccgaggaggcgttcgtcgtgctgcgcgaggcgctgcgcaagacgcgcaagatcggcatg
ggccagctggcgctgcgcggccgcgaatatgtcgtcagcctgaaaccctgcgggcgcggg
ctggtgctggagacgttgcgctattcggacgaggtccaccgcgcttccggctatttccgc
gacatcggcgacaccaagcccgaggaggatctgctcgatctggcaacgacgctgatcgac
aagaaggccggcaagttcgacgccgcccatttccacgatcgctatatcgacgcgctcaag
gagctgatcgagcgcaagcgcaagggccgcacgatcgagaccgacgaggaggatgccaag
ccggcggcgcgcggcggcaacgtcgtcgacctgatggcggcgctcaagaagtcgctcgag
aagggcaacgccaaggaggcgcccgccgccaaggccccggccaggaaggccgcgccgaag
aagcccgccaatgacacgaccaccacccgtaaggcgcccgccaagaaggcgccggcgcgc
aagcgggcctga
DBGET
integrated database retrieval system
