Sneathiella marina: NBZ79_12930
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Entry
NBZ79_12930 CDS
T08200
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
snea
Sneathiella marina
Pathway
snea00260
Glycine, serine and threonine metabolism
snea00460
Cyanoamino acid metabolism
snea00630
Glyoxylate and dicarboxylate metabolism
snea00670
One carbon pool by folate
snea00680
Methane metabolism
snea01100
Metabolic pathways
snea01110
Biosynthesis of secondary metabolites
snea01120
Microbial metabolism in diverse environments
snea01200
Carbon metabolism
snea01230
Biosynthesis of amino acids
snea01240
Biosynthesis of cofactors
Module
snea_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NBZ79_12930
09102 Energy metabolism
00680 Methane metabolism
NBZ79_12930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NBZ79_12930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NBZ79_12930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NBZ79_12930
Enzymes [BR:
snea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NBZ79_12930
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
USG63268
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Position
complement(2697591..2698841)
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AA seq
416 aa
AA seq
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MGRDDPDVFAAIGQELGRQQNQIELIASENIVSPAVMAAQGSVLTNKYAEGYPGRRYYGG
CEYVDIVETLAIERAKELFGCEFVNVQPNSGSQANQGAFMALIKPGDTILGLSLDAGGHL
THGAKPNQSGKWFNAVHYGVDKETHQINMDEVRALAKEHKPQLIIAGGSAYPRTLDFAAF
REIADEVGAYFMVDMAHFAGLVAAGLHPSPFPHAHVATTTTHKTLRGPRGGMVLTDDAAI
AKKVNSAIFPGMQGGPLMHVIAGKAVAFKEALSPEFREYAARVVANADILAKTLIRHGLD
IVSGGTDTHVMLVDLRPKGLTGNVAERSMENAFITCNKNGIPFDPEKPMVTSGVRLGTPA
ATTRGFGTAEFAKVGDLIAEVLDGLVANPEDNSAVEAKVRAEVKILCDAFPIYPNL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgggacgggatgatcccgatgtttttgcggccattggccaggaacttggacggcagcaa
aaccagatcgagctgatcgcgtcggaaaatatcgtcagccccgccgtcatggcggcgcag
ggatcggtgttgaccaataaatatgcggaaggctatcctggacgccgctattatggcggc
tgcgagtatgtggatattgtcgaaacactggccatcgagcgggcgaaggaactgttcggc
tgcgagtttgtcaatgtgcagcccaattctggatcgcaggcaaaccagggcgcctttatg
gcgctgatcaagccgggcgataccattctgggcctgtccctggacgccggcgggcatctg
acccatggcgccaagcccaaccagtccggtaaatggttcaacgccgtgcattacggcgtc
gacaaggaaacccatcaaatcaacatggacgaggtgcgcgcccttgccaaagagcataag
ccacaattgattattgccggtggatctgcctatccgcggaccctcgatttcgccgcgttc
cgggaaattgccgatgaggtgggtgcgtatttcatggtggatatggcgcatttcgccggt
cttgtggccgccggtctgcatccaagcccgtttccccatgcccatgtggcgacgacgacg
acccataaaacattgcgcggcccgcgcggcggcatggtcctgaccgacgatgcggccatc
gccaagaaagtgaattcagccatcttccccggtatgcagggcggccccctgatgcatgtc
attgccggcaaggccgtggcgttcaaggaagccttgtcaccggaattcagggaatatgcg
gcgcgtgtggtcgccaatgcggatattctggcgaagacattgatccgtcacgggctggac
atcgtgtccggcgggacggatacccatgtgatgttggtcgatcttcgtcccaagggactg
accgggaatgttgccgagcggtccatggaaaatgcctttatcacctgcaacaagaacggt
attccgtttgatccggagaagccgatggtgacgtccggtgtccgtttgggaacgcctgcg
gcgacgacccgtggtttcgggaccgcagaatttgcaaaagtcggcgatcttatcgccgaa
gtccttgacggattggtagcaaacccggaggataacagcgctgtcgaggcaaaagttcgg
gccgaggtgaagatactttgtgatgcttttccaatttatccgaacctttag
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