Serratia nematodiphila: NLX84_03800
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Entry
NLX84_03800 CDS
T08619
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snem03021
]
NLX84_03800 (rpoS)
Transcription machinery [BR:
snem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLX84_03800 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UTO02221
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All DBs
Position
839930..840928
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AA seq
332 aa
AA seq
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MSQNTLKVNELHDDADFDENGAEAESFDEKALVEEETSENDLAEEELLSQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
ADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQMQGLSIEALFRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttacatgatgatgcggatttcgacgagaat
ggagctgaggccgagtcgtttgatgaaaaagcgctggtagaagaagagaccagcgagaac
gatttagcggaagaagagctgttgtctcaaggcgttacgcaacgcgtattggatgcgacg
cagctctatctgggtgagatcggttattcacctctgctgaccgcagaggaagaagtctat
tttgcgcggcgtgctctgcgcggtgacgtgccgtcccgccgccgcatgattgaaagcaac
ctgcggctggtggtgaaaatcgcccgccgctacagcaaccgcggtctggcgctgctggat
ctgatcgaagagggtaacctcggtctgattcgcgcagtggaaaaattcgacccggaacgc
ggcttccgcttctccacttatgcaacctggtggatccgtcagacgattgaacgggcgatc
atgaaccaaacccgtaccattcgtttgcctatccatatcgtcaaagaactgaatgtctat
ctgcgcaccgcgcgcgagctttcccacaagctggatcatgaaccgagcgctgaagaaatt
gccgagcaactcgacaagccggtggatgacgtcagccgcatgctgcgcctgaatgagcgc
atcacctcggtggatacgccgctgggcggggattcggagaaagcgctgctggacattctg
gccgacgagaaggacaacgggcctgaagacaccacgcaagatgacgatatgaagcaaagc
atcgtcaaatggctgttcgaactgaacgccaaacagcgtgaagtgttggcgcgtcgtttc
ggcctgctgggctatgaagcggcgacgctggaagacgtaggccgggagattggcctgacg
cgcgagcgcgtccgtcagattcaggtagaaggtctgcgccgtctgcgtgagattttgcag
atgcagggcctgagcattgaggcgctgttccgcgaataa
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