Serratia nematodiphila: NLX84_05870
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Entry
NLX84_05870 CDS
T08619
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snem03016
]
NLX84_05870 (miaB)
Enzymes [BR:
snem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NLX84_05870 (miaB)
Transfer RNA biogenesis [BR:
snem03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NLX84_05870 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UTO02604
LinkDB
All DBs
Position
complement(1259515..1260939)
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AA seq
474 aa
AA seq
DB search
MTKKLHIKTWGCQMNEYDSSKMADLLNSTHGFEWTENAEEADVLLLNTCSIREKAQEKVF
AMLGRWRLLKEKNPSVIIGVGGCVASQEGELIRSRAPCVDVVFGPQTLHRLPEMINHVQG
TRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPSDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGATHDGDICSFAELLRLVAAIDGIDRIRFTTSH
PIEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRAHTALEYKAIIRKLRKARPNI
QLSSDFIVGFPGESQADFEQTMNLIADVNFDVSFSFIYSSRPGTPAADMVDDVSEEEKKQ
RLYILQDRINQQALQFSRRMLGTVQRILVEGTSRKSVMELAGRTECNRVVNFEGTPDMIG
QFVDVEITEVLTNTLRGAVVRTEQQMDLRVHESPQSVIARTRKENALGVGIYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaactacatatcaaaacctggggctgccagatgaatgagtacgattcatcg
aaaatggccgacctgttgaacagcacgcacggcttcgagtggaccgaaaacgccgaagaa
gcggacgtgctgttgcttaacacctgctcgatccgcgaaaaagcgcaggagaaagttttc
gccatgctggggcgctggcgcttgctgaaagaaaagaacccgtctgtcatcatcggggtc
ggcggttgcgtggcctcgcaagaaggtgaactgatccgcagccgcgcgccctgcgtcgac
gtggtattcggcccgcagaccctgcaccgcctgccggaaatgatcaaccacgtccagggc
acccgcagcccggtggtcgacatcagcttcccggagatcgaaaaattcgaccgtctgccg
gaaccgcgcgccgaaggcccgaccgcgttcgtgtcgatcatggaaggctgcaacaaatac
tgcactttctgcgtggtgccttacacccgcggtgaagaagtgagccgcccgagcgacgac
gtgctgttcgaaatcgcccagctggcggcgcagggcgtgcgcgaggtcaacctgctcggc
caaaacgtcaacgcttaccgcggcgccacgcatgacggcgatatctgctcgttcgccgaa
ctgctgcgcctggtggcggccatcgacggcatcgatcgcattcgcttcaccaccagccac
cctatcgagttcaccgacgatatcatcgcggtgtacgaagacacgccggaactggtcagc
ttcctgcatctgccggtgcagagcggttcggatcgcatcctgaccatgatgaaacgcgcc
cacaccgcgctggagtacaaggcgattatccgcaagctgcgcaaggcgcgcccgaacatt
cagctcagctccgatttcatcgtcggtttcccgggcgagagccaggccgacttcgaacag
accatgaacctgatcgccgacgtcaacttcgacgtcagcttcagcttcatctattcgtcg
cgcccgggcaccccggcggcggacatggttgacgacgtcagcgaagaagagaaaaagcag
cggctatacattctgcaggatcgcatcaaccagcaggcgctgcagttcagccgccgcatg
ctcggcaccgtccagcgcattctggtggaaggcacctcgcgcaaaagcgtaatggaactg
gccgggcgcacggagtgcaaccgtgtggtaaacttcgaaggcacgcctgacatgatcggc
cagtttgtcgacgtggaaattaccgaggtgctgaccaacaccctgcgtggcgcagtggtg
cgcaccgaacagcagatggatctgcgcgtacatgaatccccgcagtcggtgatcgcccgt
acccgcaaagaaaacgcgctgggcgtcggcatttaccagccctga
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