KEGG   Serratia nematodiphila: NLX84_21315
Entry
NLX84_21315       CDS       T08619                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
snem  Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:snem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:snem02044]
    NLX84_21315 (traD)
Secretion system [BR:snem02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   NLX84_21315 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind T4SS-DNA_transf DUF87
Other DBs
NCBI-ProteinID: UTO00879
LinkDB
Position
complement(4480190..4482304)
AA seq 704 aa
MSNRHVMEALLRPAVELNTAIVAGAAAAICFAAPWSVALAPSVSYVTAGGFAVLSAVRAR
QGLRVVRYRRNLRRLPRYVMTSAQIPVSRQRLFLGRGFRWQQKHTQRLMDTRRPEVEKYV
QPPKMYQVARRLELKTEYTLPWLSQLLRKDSPLNPVRPLPPVGGNPAIHGIEPDELDVSM
ALGERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAG
RGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVA
RALVALGQRPDYQLITRYVNNISELYETYAKKVIEARMPALQQQIDNSLQVLTEDDVPRN
MQGQPNAIKIMAVEMALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTT
GKTAELLAPNYMDMSDPRPIFDWEQVIRKRGIVYVGLDALSDGVVASAVGNSMFADLVSV
AGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTES
DIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDIYTKTLVSGHADTADV
EKGQDFTSNTQDRVGTVKAPLLAPADVINLPKGQAFALLEGGQLWKIRMPLPSGDRDDAL
MPANLQKIAEEMQRNYRTSESWWSASTVMPDVAIKGGLNVASGE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgagtaatcgccatgtgatggaagcgctgctgcgcccggcggtagaattgaataccgcg
atcgttgccggtgctgcggcagcgatttgttttgctgctccctggtcggtcgccctggcg
ccgtcggtgagttatgttactgccggcgggtttgcagtgctgtccgcggtacgggcacgg
cagggcctgcgggtggtccgttatcgccgcaatctgcgtcggttgccgcgctatgttatg
actagcgcacagatcccggtgagccggcagcggctgttcctggggcggggtttccgttgg
cagcaaaagcacacccagcgtttgatggacacccgccgtccagaggttgagaaatatgtt
cagccgccaaaaatgtaccaggtggcgcgccgactggagcttaaaaccgaatataccctg
ccgtggttgtcccagctgctgcgcaaggattctccactcaatccggtgcggccgctgcca
ccggtcggggggaacccggcgatccatggtattgaacccgatgagctcgatgtctcgatg
gcactgggtgaacgcgtagggcatagcctggtgttgggcactactcgtgtcggtaagacc
cgcctggcggaactgctgatcacccaggatattcgccgcggtgacatcaccattgtgttt
gatccgaaaggggatgctgacctgctgcggcgtgtttgggctgaagcccaccgtgccggc
cgtggggatgagctgttcatcttccacctgggctggccggatatctcggcacgctataac
gccgtcgggcgctttgagcgtgtgtccgaagtggccgggcgtatttccgggcaactgagc
ggagagggcaatagtgcggcgttccgtgagtttgcctggcgattcgtcaatattgtggcg
cgtgccctggtcgcgctggggcaacgtccggactatcagttgatcacccgttacgtgaac
aacatcagcgagctgtatgagacctacgcgaagaaagtgattgaggcgcgtatgccggcg
ctgcagcaacaaatcgataacagcctgcaggtgctgacggaggacgatgtcccgcgaaat
atgcagggccagccgaacgcgataaaaatcatggcggtggaaatggcgctgagttccgag
gccggcaagcagctgtatgatcccattctcgatggactgcgtagtgccgtgagatatgac
cgtacctacttcgataaaattgtggcgtcactgctgccgctgctggaaaaacttaccacc
ggcaagaccgccgagctcctggcgccgaactatatggatatgagcgacccgaggcccatt
tttgactgggaacaagttatccgcaagcgcggcattgtctacgtggggttggatgccctg
tcggacggggtggtcgcctctgccgtcggcaacagcatgtttgccgacctggtgtcggtt
gccggtcatatttataaacacggcatgcacggcgggttgccgacccgggcagacggtaaa
ctgccgatcaacctgcattgtgacgagttcaacgagctgatgggggacgaatttatcccg
cttatcaacaagggcggcggcgccggtatgcaggtgacggcctacacgcaaaccgagtcg
gatatcgaggcgcgcatcggcagtaccgcgaaggcggctcaggtgacaggtaacttcaat
accctgattatgctgcgtgtgcgtgagaaccgcactgcgcagttgcttaccacacagttg
ccggaagtggatatctacaccaaaaccctggtatcagggcatgccgatacggccgatgtg
gagaagggacaggattttacctccaatacccaggaccgcgtcggtactgtgaaagcccct
ctgcttgccccggcggatgtgattaacctcccgaaagggcaggcgttcgcgctgctggaa
ggtggtcaactgtggaagattcggatgccactgcccagcggcgacagggatgatgcgctt
atgccggccaacctgcagaagattgccgaggagatgcagcgcaactaccgtaccagcgag
tcttggtggtctgccagcacggtaatgccagatgttgccatcaaaggggggctgaatgtc
gcaagcggtgaataa

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