Streptomyces nojiriensis: JYK04_05178
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Entry
JYK04_05178 CDS
T07326
Symbol
gabD2
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00250
Alanine, aspartate and glutamate metabolism
snf00310
Lysine degradation
snf00350
Tyrosine metabolism
snf00650
Butanoate metabolism
snf00760
Nicotinate and nicotinamide metabolism
snf01100
Metabolic pathways
snf01120
Microbial metabolism in diverse environments
Module
snf_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JYK04_05178 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYK04_05178 (gabD2)
00310 Lysine degradation
JYK04_05178 (gabD2)
00350 Tyrosine metabolism
JYK04_05178 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JYK04_05178 (gabD2)
Enzymes [BR:
snf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JYK04_05178 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JYK04_05178 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JYK04_05178 (gabD2)
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Motif
Pfam:
Aldedh
OmdA
Motif
Other DBs
NCBI-ProteinID:
QTI47329
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All DBs
Position
5492224..5493855
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AA seq
543 aa
AA seq
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MTDSQAPAAPLRTAPEPTNPVAPAPAGARTAADVVTPDLVARLTRGVIGSGRTANHTPFT
GDRLAELPEATPEDVAEAFDRARAAQPAWAAVPVAKRAAVLLRFHDLVLDRQAEVLDLIQ
LETGKARLHAHEEVQAVAVSARHYGRKAPGYLRPKGHTGAMPTLTKVTELRQPRGVVGQI
APWNYPLELSVGDALPAFVAGNALVMKPDTETALTALWARDLLIEAGLPAEVFQIVLGEG
PVVGPEVVRHADYVSFTGSTRTGREVARGAADRLVGVSLELGGKNAMLVLHDADIEKAAA
GAVRACFSSAGQLCISIERLYVHASIADAFVERFAARTKAMRLGASLAYGADMGSLVGER
QLETVQRHVDEAVAKGATLVAGGTARPDIGPLFYEPTILDGVEAPMAVCGEETFGPVVSI
YRFTDEDRAIAEANATAYGLNSSVWTKDARRGHAVAARLRTGTVNINEGYAPAYGSAQAP
MGGMKDSGLGRRHGSEGILKYTEAQTVAHQRLLPMAPSLGMDDEKYAAFMTRSLKVMKAL
RLR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcgcaggcccccgccgcccccctccggaccgcaccggagcccaccaacccg
gtcgccccggccccggccggtgcccgcaccgccgccgacgtggtgacccccgacctggtc
gcccggctgacccgcggagtgatcggatccggccgcaccgccaaccacacccccttcacc
ggggaccggctggcagagctcccggaggccacccccgaggacgtggccgaggccttcgac
cgggcccgcgccgcccagcccgcgtgggcggcggtccccgtcgccaagcgggcggcggtc
ctgctgcgcttccacgacctggtcctcgaccggcaggccgaggtactcgacctgatccag
ctggagaccggcaaggcccgcctgcacgcgcacgaggaggtccaggcggtcgccgtctcg
gcccgccactacgggcgcaaggcccccggctacctgcgccccaagggccacaccggcgcc
atgcccaccctcaccaaggtcaccgaactgcgccagccccgcggggtcgtcggccagatc
gccccctggaactaccccctcgaactgtccgtcggcgacgccctgcccgccttcgtggcg
ggcaacgcgctcgtcatgaagcccgacaccgagaccgcgctgaccgccctgtgggcccgc
gacctgctgatcgaggccggcctgcccgccgaggtgttccagatcgtgctcggcgagggc
cccgtcgtcggccccgaggtggtccggcacgcggactacgtctccttcaccggctccacc
cgcaccggccgcgaggtcgcccggggcgccgcagaccgcctcgtcggggtctccctcgaa
ctcggcggcaagaacgccatgctcgtgctgcacgacgccgacatcgagaaggccgccgcg
ggcgccgtccgcgcctgtttctcctccgccggacagctctgcatctccatcgagcggctc
tacgtccacgcctcgatcgccgacgccttcgtggagcggttcgccgcccgtacgaaggcc
atgcggctcggcgcctccctcgcctacggcgccgacatgggctccctggtcggcgagcgc
cagctggagaccgtacagcggcacgtggacgaagccgtggccaagggcgccaccctcgtc
gccggcggcaccgcccgccccgacatcggcccgctcttctacgagcccaccatcctggac
ggcgtcgaggcccccatggcggtgtgcggcgaggagaccttcggccccgtcgtctcgatc
taccgcttcaccgacgaggaccgggccatcgccgaggccaacgccaccgcgtacggcctg
aactccagtgtctggaccaaggacgcccgccgcggccacgccgtcgccgcccgcctgcgc
accggcaccgtcaacatcaacgagggctacgcccccgcctacggcagcgcccaggccccg
atgggcggcatgaaggactccggcctcggccgccgccacggctccgagggcatcctcaag
tacaccgaggcccagaccgtcgcccaccagcgactgctcccgatggcgccctcgctgggc
atggacgacgagaagtacgcggcgttcatgacccgcagcctcaaggtcatgaaggccctc
cgactccgctag
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