Streptomyces nojiriensis: JYK04_05692
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Entry
JYK04_05692 CDS
T07326
Symbol
pbpA_4
Name
(GenBank) Penicillin-binding protein A
KO
K05364
penicillin-binding protein A
Organism
snf
Streptomyces nojiriensis
Pathway
snf00550
Peptidoglycan biosynthesis
snf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYK04_05692 (pbpA_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snf01011
]
JYK04_05692 (pbpA_4)
Peptidoglycan biosynthesis and degradation proteins [BR:
snf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JYK04_05692 (pbpA_4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QTI47841
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Position
6039902..6041362
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AA seq
486 aa
AA seq
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MIRYIRWCAYFCALLLVALLVNIARVQVWESAAYGANPANKRPAIERYAKPRGDILVDGR
PVTGSRDSGQLLRYERTYANGPLYAPVTGFSSQTYGTSFVERAEDAILSGTDPGLSAFPL
WYELARGRPAGGNAATTVRSGMQLAAYAGLAGKRGAVAAVEPATGKILALVSSPSYDPSV
LSGTGTKVKEAWSALNADPARPMLNRALRETYPPGSTFKIVTAAAALDAGVVTDVDAPTR
TPDPYPLPGTSTLLPNAGTGCEDASMADAVQWSCNTVMAKIGVQVGLRKMVEAARRFGFN
TEGLRVPSWVSRSNFDTDMSQDQLALSSIGQFNTTATPLQMAMVAAAVANGGELTYPYLV
ERTTQDDGSQVRRGDQRSLGRAMNPATALRLQELMVKVVENGTGRNAAIPGAVVGGKTGT
AQHGVGNAGTPYAWFISWARAEGTALPQVAVAVVVEDASADRGDISGNGAAAPIARAVME
AALATG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgctacatccgctggtgcgcgtacttctgcgccctcctgctggtcgccctgctg
gtcaacatcgcccgcgtgcaggtctgggagtccgccgcctacggcgcgaacccggcgaac
aagcgccccgccatcgagcgctacgccaagccccggggggacatcctggtcgacgggcgc
cccgtcaccggctcccgcgacagcggccaactgctgcgctacgagcggacgtacgcgaac
ggcccgctctacgcgcccgtcaccggcttctcctcccagacctacgggaccagcttcgtc
gagcgcgccgaggacgcgatcctgtcgggcaccgaccccgggctctccgccttcccgctc
tggtacgagctggcccgcggccgccccgccggcgggaacgccgccaccaccgtccgctcc
ggcatgcagctcgccgcgtacgccgggctcgccggcaagcgcggcgcggtcgccgccgtc
gagcccgccaccgggaagatcctcgcgctggtcagcagcccctcgtacgacccttccgtg
ctctccggtacgggtacgaaggtcaaggaggcctggtccgccctgaacgcggaccccgcc
cggccgatgctcaaccgggcgctgcgcgagacgtacccgcccggctccaccttcaagatc
gtgacggctgcggccgccctcgacgcgggcgtggtcaccgatgtggacgcgccgacccgc
acccccgacccctacccgctgcccgggaccagcaccctgctgccgaacgcgggcaccggc
tgcgaggacgcctcgatggcggacgcggtgcagtggtcctgcaacacggtgatggcgaag
atcggcgtacaggtcgggctgcgcaagatggtggaggccgcgcggcgcttcggcttcaac
accgaggggctgcgggtgccctcgtgggtctcccggtcgaacttcgacaccgacatgagc
caggaccagctggccctgtcctcgatcgggcagttcaacaccacggcgacaccgctgcag
atggccatggtggcggcggccgtcgcgaacggcggcgagctcacgtacccctacctggtg
gaacggacgacccaggacgacggttcccaggtccggcgcggcgaccagcgcagcctgggc
cgggcgatgaacccggccaccgccctccggctgcaggagctgatggtcaaggtggtggag
aacgggacgggccgcaacgccgcgatcccgggcgcggtggtcggcggcaagacgggcacc
gcgcagcacggcgtcggcaacgcggggaccccgtacgcctggttcatctcctgggccagg
gccgagggcacggcgctgccgcaggtggcggtcgcggtggtggtcgaggacgcgtcggcc
gaccggggcgacatcagcggcaacggcgcggcggcgccgatcgcgcgggcggtgatggag
gccgcgctggcgaccggctga
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