Simkania negevensis: SNE_A18890
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Entry
SNE_A18890 CDS
T01559
Symbol
truA1
Name
(GenBank) tRNA pseudouridine synthase A 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sng
Simkania negevensis
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sng03016
]
SNE_A18890 (truA1)
Enzymes [BR:
sng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SNE_A18890 (truA1)
Transfer RNA biogenesis [BR:
sng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SNE_A18890 (truA1)
Prokaryotic type
SNE_A18890 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CCB89766
UniProt:
F8L3C2
LinkDB
All DBs
Position
gsn.131:1971834..1972571
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AA seq
245 aa
AA seq
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MSKYKITLSYDGYPFGGWQIQPNTSSIQGHLQQVFELLIGEPITVIGSGRTDAGVHAKKQ
VAHFETEKELPSTFLDDANSKLPSEIRLLSIEKVEANFHARFSAVQKTYHYHISTAPVLS
PFECRYRTHLYYEMDLENLQQALKYFIGTHDFSSFANERGTPCSPIKTLHALNYVPEGDG
KFRLEFTGNGFLYKMVRNLVGTLVYVARGKLSLKELSDLIEAKNRRLAPPPAPPQGLFLT
SVEYK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatataaaatcactttaagttatgacggttatccattcgggggatggcaaatc
caacctaatacttcttccatccaaggacacttacaacaagttttcgaactcttgattgga
gagcccatcaccgtgatcggatcgggacgaaccgatgcgggagttcatgctaaaaaacag
gttgcacattttgaaacagaaaaagagcttccttctacatttttagatgacgccaatagt
aaactcccctcagaaatccgcctgttatctatagaaaaagtcgaagcaaactttcatgca
cgctttagcgccgtgcaaaaaacctaccactatcacatttcgactgcacccgtattaagc
ccctttgaatgccgttaccggacccatctttactatgaaatggacctcgaaaatcttcaa
caagctctgaaatattttattggcactcacgacttttcctcatttgcaaatgaacggggc
accccctgttcccccatcaaaaccctccatgcactaaactatgttcccgaaggagatggt
aaatttcgtcttgaatttaccggaaatggatttctctacaagatggtccgtaatctcgta
ggaacgctcgtttatgttgctcgcggcaagctttctctcaaagaactctcagatcttatc
gaagcaaaaaatcggcgcctcgcgcctcctcccgcccctccacaaggtttgtttctaacg
tctgtagaatataaataa
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integrated database retrieval system
