Salvelinus namaycush (lake trout): 120017612
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Entry
120017612 CDS
T07522
Name
(RefSeq) core histone macro-H2A.2-like
KO
K11251
histone H2A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
snh04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120017612
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120017612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120017612
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120017612
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
120017612
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120017612
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Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
120017612
NCBI-ProteinID:
XP_038816422
UniProt:
A0A8U0P1A6
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Position
Sna22:16074070..16079964
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AA seq
371 aa
AA seq
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MSARGGKKKSTKLSRSARAGVIFPVGRMMRYLRTGTHKYRIGMGAPVYMAAVIEYLAAEI
LELAGNAARDNKKGRITPRHIKLAVANDEELNQLLRGVTISNGGVLPRIHPELLSKKRGS
RVKVDTQVTVPEKRAERVKSIKKPTTKKGKGKPGRKQRKNTENDKEAVVANSTVEDGPGD
GFTILSAKSLFLGQKLSLTESEISKIGTIKVEGIINPTNAEMDLKEGVGSALEKAGGRDF
LEAVKELRKAQGPLEVASVAVSQASGMPARFVIHCNIPQWGSEKCEDQLEKTVKACLSAA
EEKKLKSVAFPSLPAGRNGFPKQTAAQLILKAISNHFVSATTSSLKNIYFVLFDSESIGI
YLQEMAKLDAK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccgaggaggaaagaagaagagcaccaaactgtcccgctccgccagagcaggg
gtcatctttcctgtggggaggatgatgaggtatctacgcacagggacgcacaagtaccgc
atcggcatgggggcacccgtctacatggcagccgtcatagagtacctggcagctgagatt
ttggagttggcagggaatgcagcaagggacaacaaaaaaggcagaataactcctcggcac
attaaactggctgtcgccaacgatgaggagctcaaccagcttctcagaggggtgaccata
tcaaacggaggggtcctgcctcgcatccaccctgagctgctgtccaagaagaggggcagc
cgagtgaaagtggacactcaggtgactgtgccagagaagagggcggaacgcgtcaagagc
atcaagaaacctaccaccaaaaaaggcaaaggcaaaccaggccgaaagcagaggaaaaac
acggaaaacgacaaagaggctgttgtagctaactcaacagtggaagatgggccaggtgat
ggattcactatcctctcagcgaaaagcctgttccttggacaaaagctttcactaacagag
agtgaaattagcaaaattggaaccatcaaggtggagggaatcatcaaccccacaaatgca
gagatggacctcaaagagggagtgggcagtgccctggagaaggcaggggggcgagacttc
ttggaggcagtgaaagaactgcggaaagcacagggacctttggaggtagcatcagttgcg
gtgagccaggccagtgggatgccagctcgttttgtcatccactgtaacatccctcaatgg
ggctcagagaagtgtgaggaccagctggagaagactgtcaaggcctgcctctctgctgca
gaggagaagaaactcaagtctgttgccttcccctcacttcctgctggccggaatggattc
ccaaagcaaacagccgcccagctgatcctcaaggccatctccaaccattttgtctctgcg
acgacctcctccctgaaaaacatttactttgtactgtttgacagcgagagcatcggaata
taccttcaggaaatggccaagctggatgccaagtga
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