Salvelinus namaycush (lake trout): 120018556
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Entry
120018556 CDS
T07522
Symbol
tyw1
Name
(RefSeq) LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120018556 (tyw1)
Enzymes [BR:
snh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
120018556 (tyw1)
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120018556 (tyw1)
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
Flavodoxin_1
Radical_SAM
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
120018556
NCBI-ProteinID:
XP_038817701
UniProt:
A0A8U0P4D2
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Position
Sna23:complement(23925677..24028511)
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AA seq
630 aa
AA seq
DB search
MYSQLHRFPLDRTRKTVRSTFKSIFLSVWQNRIYLHTAADVLVGIWFSDGYSVKKVVHVS
KALIFFGSQTGTAKLQCSKLICMFLLAMYTDRQPTENAEWFWRCLEEASTDFRYGKAYLK
GLRYAVFGLGNSVYGSHYNTVSKNVNKWLWMLSGIRVLSRGDGNCNVVKSHNGSLQADXK
FLSCLQALVAGQKNCSGNCKMCSSCKTRNRKKPQKKTEDYQAFPEQLSSKEELVESGSDE
ETAGSEENSPGSVIDVEDLGNILNGIKKTKKREQSQEDGQIVKLSMLNGMMKAEEKEERR
ELITAALREALTKQGYKLIGSHSGGKLCRWTKSMLRGRGGCYKHSFYGIESHRCMESTLS
LVCANKCDFCWRWWRWKMDLPEKILLEAVENHQNMFQQQGGVNKCTSQAEEVCVVIRLSN
FMVPKAQFPQEIRWGCLXSLVPVTKLYVSVGAGTKGSLKKIDRLLFKDFWPRFLDSLKAL
GEKFKVEGEWWTWIDYERFQELVHAYXGSQTFSAQDYMAKTPTQALFGAQEXGFDPTDTR
YQMRHKTKDISGCCERTCNMPTYSVPLEGRCRQGDGCVTCLLSRELFFITIIIAQGLVTE
HFDRHQGGREGANLKVPVPADHLRLLRRYL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtatagccagctacatagattccctttggaccgaacaaggaagacagtccgcagcacc
ttcaagagtatttttttgtccgtatggcagaacaggatatacttgcacacagctgccgat
gttttggttggaatttggttctcagatggttacagtgttaagaaagtggttcatgtatct
aaagcactgatattctttggatcacagactggaactgcaaagctccagtgctccaagttg
atctgtatgttcctattggctatgtacactgacagacagcccacagaaaatgctgaatgg
ttctggaggtgtctggaggaggcatccactgacttcagatatgggaaagcctacctgaaa
ggactgagatatgcagtgtttggcctgggcaactctgtgtatggcagccattacaatacg
gtgagtaagaacgtgaacaagtggctgtggatgctgagtggcatccgggttctgtccaga
ggagatggcaactgcaacgtagtgaagagccacaatggcagcctgcaggctgacnncaag
ttcctgagctgcctgcaggccctggttgcagggcagaagaactgtagtggaaactgtaag
atgtgcagctcctgtaagaccaggaacaggaagaaaccacagaagaagactgaggactat
caggcatttccagaacagctcagctctaaggaggagctggtagagtccggtagtgatgag
gagacagctgggtcagaggagaatagcccaggctcagtcatcgatgtggaggatctagga
aacatcttgaacggcatcaagaaaaccaagaagagagagcagagccaggaggatggacag
attgtgaagctgtccatgctgaacggaatgatgaaggctgaggaaaaggaggagaggaga
gagttgatcactgctgccctgagggaggccctgactaagcaaggatacaaactcatagga
agtcactcaggaggcaagctttgtcgttggaccaagtccatgctaagaggaagaggaggt
tgttacaagcactccttttatggcatcgagtcccacaggtgtatggagtccacccttagc
ctcgtctgtgccaacaagtgtgacttctgctggaggtggtggcgctggaagatggacctg
cctgagaagatactactggaggctgtggagaaccaccagaacatgttccaacagcaaggg
ggagtgaacaagtgtacatcacaggcagaggaggtttgcgtagtcattaggctctccaac
ttcatggtccccaaggcacagttcccccaggagatcaggtgggggtgcctctgaagtctg
gtaccggtgaccaagctgtatgtgagtgtgggtgccggcaccaagggcagtctgaaaaag
atcgaccggctgctcttcaaagacttctggccgaggttcctggacagcctcaaggctctg
ggtgaaaagttcaaggtggagggagagtggtggacgtggatagactacgagcggttccag
gagcttgtccatgcctatngaggcagccagaccttctctgcccaggactacatggccaag
accccgacccaggccctgtttggtgcccaggagtgaggcttcgacccaacagacacacgc
taccagatgagacacaagaccaaagatatctcaggatgctgtgagaggacctgcaacatg
cccacctactcagtcccgctggagggacgttgtcgtcaaggagacggatgtgtcacctgc
cttctgagtcgagaacttttcttcatcaccatcatcattgctcagggtctcgtaactgag
cactttgacaggcaccagggagggagggagggggccaacctgaaagttccagtccccgcc
gaccacctgcgtctcctcaggcgctacctgtga
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