Salvelinus namaycush (lake trout): 120027602
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Entry
120027602 CDS
T07522
Symbol
idi1
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase 1 isoform X1
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00900
Terpenoid backbone biosynthesis
snh01100
Metabolic pathways
Module
snh_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
snh_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120027602 (idi1)
Enzymes [BR:
snh01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
120027602 (idi1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
120027602
NCBI-ProteinID:
XP_038828522
UniProt:
A0A8U0PP24
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Position
Sna33:14499767..14502616
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AA seq
289 aa
AA seq
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MVRGLWAVLRVVSSEGRALLKPNIPVSGGLGITRNPIFHSRSVSLRNISSSEVRKLRGSA
VGMPEINTDNLDEKQVQLLAEMCILIDENDQKTGADSKKNCHLNSNIDKGLLHRAFSVFL
FNSEDKLLLQQRSDAKITFPGCYTNTCCSHPLHTSSELEELEAIGVRRAASRRLEAELGI
PMDQVPPEEMTYLTRIHYKAQSDGVWGEHEIDYILFMQKDIEVNPDPNEIKTHCYVTKEE
LKEMLKKAKNNELLITPWFSLIAETFLFQWWDNLQNLKQFMDHDKIHRM
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcggcttgtgggcggtgcttcgggtggtgtccagcgagggacgtgctttgtta
aagccaaatatacctgtttctggaggactaggcattacaagaaatcctatatttcactcc
aggtctgtctctttgaggaatatatcaagcagtgaggtgagaaagctgcgagggtctgct
gtcgggatgcctgaaataaatacagataacctggacgagaagcaggtccagctgctggca
gagatgtgtatccttattgacgagaacgaccagaagactggagcagacagcaaaaagaac
tgccacctcaactctaatattgacaaaggcttattgcatcgtgcattcagcgtcttcctg
ttcaacagtgaagacaagctgctcttacaacagagatctgatgctaagatcacttttcca
gggtgttataccaacacatgctgcagtcaccccttacacacatccagtgagctggaggag
ctagaggccatcggggtgaggagagctgcatcaagacgactggaagccgagctgggaatt
cccatggatcaggttccaccagaggagatgacctatttgacccgtatccactacaaggcc
cagtcagacggtgtgtggggggaacatgagatcgactacatcctcttcatgcagaaagac
atagaggtgaacccagaccccaatgagatcaagacccactgttatgtcaccaaagaggag
ctgaaagagatgctgaagaaggccaagaacaacgagttactgatcacgccctggttcagc
ctcatcgcagagaccttcctcttccagtggtgggacaacctgcagaacctcaaacagttc
atggatcatgacaaaatacacaggatgtga
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